RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 CCDC50Q8IVM0 306 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 ATG4AQ8WYN0 398 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 LAMB2P55268 1798 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 IGKV6D-41A0A0C4DH26 115 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 TMEM120BA0PK00 339 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ASAP2O43150 1006 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 SNX3O60493 162 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 GHRP10912 638 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 CHKAP35790 457 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 NPEPPSP55786 919 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 NCALDP61601 193 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 SLC17A8Q8NDX2 589 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 CENPTQ96BT3 561 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ATP6V0A4Q9HBG4 840 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 GGA1Q9UJY5 639 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 PFASO15067 1338 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 EEF2P13639 858 aaKnown RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 RNASELQ05823 741 aaKnown RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 C6orf118Q5T5N4 469 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 PRUNE1Q86TP1 453 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ARHGEF19Q8IW93 802 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 SLFN12Q8IYM2 578 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 CNBD1Q8NA66 436 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ERMNQ8TAM6 284 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ARHGEF2Q92974 986 aaKnown RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 FAXDC2Q96IV6 333 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 APEX2Q9UBZ4 518 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 TTC7AQ9ULT0 858 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ANKRD62A6NC57 917 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 PHF2O75151 1096 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 GCLMP48507 274 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 MMP14P50281 582 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 C2CD6Q53TS8 623 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 ERICH1Q86X53 443 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 RPUSD2Q8IZ73 545 aaKnown RBP14.43□□□□□ -0.1
HDAC4-214ENST00000535493 FITM2Q8N6M3 262 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 DYDC2Q96IM9 177 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 FAM84AQ96KN4 292 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 RMDN2Q96LZ7 410 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 SYT11Q9BT88 431 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 INTUQ9ULD6 942 aa14.43□□□□□ -0.1
HDAC4-214ENST00000535493 CLDN3O15551 220 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 EXOC3O60645 756 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 MAP2K1Q02750 393 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 KYNUQ16719 465 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 CERS5Q8N5B7 392 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 KLHL29Q96CT2 875 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 PCDHB18PQ96TA0 734 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 AGPAT1Q99943 283 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 PAIP2Q9BPZ3 127 aaKnown RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 CDC42EP4Q9H3Q1 356 aaKnown RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 ARHGEF10LQ9HCE6 1279 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 WRAP73Q9P2S5 460 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 RASAL2Q9UJF2 1139 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 PCDHA3Q9Y5H8 950 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 NCANO14594 1321 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 GDF11O95390 407 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 SGPL1O95470 568 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 AGTP01019 485 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 NQO1P15559 274 aaKnown RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 MYL7Q01449 175 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 DHX34Q14147 1143 aaKnown RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 DOK7Q18PE1 504 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 GPATCH4Q5T3I0 446 aaKnown RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 FAM47EQ6ZV65 393 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 CYP4X1Q8N118 509 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 FAM167BQ9BTA0 163 aa14.42□□□□□ -0.1
HDAC4-214ENST00000535493 MTRF1LQ9UGC7 380 aaKnown RBP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.42□□□□□ -0.1
HDAC4-214ENST00000535493 AFF2P51816 1311 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 SPOPO43791 374 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 PEX19P40855 299 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 ADCY2Q08462 1091 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 ODR4Q5SWX8 454 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 SLFN13Q68D06 897 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 SYCP3Q8IZU3 236 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 ZNF570Q96NI8 536 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 LBHD1Q9BQE6 289 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-214ENST00000535493 ZSWIM1Q9BR11 485 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 DNAJC18Q9H819 358 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 FRMD4BQ9Y2L6 1034 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 ARFGEF1Q9Y6D6 1849 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 FAM187AA6NFU0 413 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 SLC16A3O15427 465 aaKnown RBP14.41□□□□□ -0.1
HDAC4-214ENST00000535493 ITIH4Q14624 930 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 EPC2Q52LR7 807 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 NAIF1Q69YI7 327 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-214ENST00000535493 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 RSRC1Q96IZ7 334 aaKnown RBP14.41□□□□□ -0.1
HDAC4-214ENST00000535493 TRIM7Q9C029 511 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 AGPAT3Q9NRZ7 376 aa14.41□□□□□ -0.1
HDAC4-214ENST00000535493 VAV3Q9UKW4 847 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms