RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 KSR1Q8IVT5 923 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 LPPQ93052 612 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 TMEM175Q9BSA9 504 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 ADAM7Q9H2U9 754 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 VAV3Q9UKW4 847 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 EML1O00423 815 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 SP100P23497 879 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 AK2P54819 239 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 CTTNQ14247 550 aaKnown RBP14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 PTPN21Q16825 1174 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 FERMT3Q86UX7 667 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 UBALD2Q8IYN6 164 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 SUSD6Q92537 303 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 MFSD1Q9H3U5 465 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 DHX33Q9H6R0 707 aaKnown RBP14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 TTC12Q9H892 705 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 SFXN1Q9H9B4 322 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 PPP4R2Q9NY27 417 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 PLXNA4Q9HCM2 1894 aa14.74□□□□□ -0.05
CLSTN3-205ENST00000535452 MYO7AQ13402 2215 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 CLASP2O75122 1294 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 OFD1O75665 1012 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 ADH1AP07327 375 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 GALTP07902 379 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 RFX1P22670 979 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 TXKP42681 527 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 NEK4P51957 841 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 RARS2Q5T160 578 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 ERICH6BQ5W0A0 696 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 APBB1IPQ7Z5R6 666 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 ALYREFQ86V81 257 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 FBXL6Q8N531 539 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 STAMQ92783 540 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 RPS6KC1Q96S38 1066 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 COLEC11Q9BWP8 271 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 ZBP1Q9H171 429 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 NRDE2Q9H7Z3 1164 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 ANKEF1Q9NU02 776 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 RNF19AQ9NV58 838 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 RGL1Q9NZL6 768 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 SORCS3Q9UPU3 1222 aa14.73□□□□□ -0.05
CLSTN3-205ENST00000535452 REV3LO60673 3130 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 POMCP01189 267 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 SSBP05455 408 aaKnown RBP eCLIP14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 NCLP19338 710 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 OR1G1P47890 313 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 RBM10P98175 930 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 CCDC149Q6ZUS6 474 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 OTOP3Q7RTS5 596 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 DIS3L2Q8IYB7 885 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 FAM184AQ8NB25 1140 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 VN1R2Q8NFZ6 395 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 GTF3C6Q969F1 213 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 FBXL18Q96ME1 805 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 EIF2AK1Q9BQI3 630 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 IFT122Q9HBG6 1241 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 IRAK3Q9Y616 596 aa14.72□□□□□ -0.05
CLSTN3-205ENST00000535452 STBD1O95210 358 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 ATP2B1P20020 1258 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 FOSBP53539 338 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 CREMQ03060 361 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 NPY5RQ15761 445 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 HAUS3Q68CZ6 603 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 SYCE2Q6PIF2 218 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 MCPH1Q8NEM0 835 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 OXER1Q8TDS5 423 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 ADPGKQ9BRR6 497 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 APOL6Q9BWW8 343 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 RAB34Q9BZG1 259 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 S1PR5Q9H228 398 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 USTQ9Y2C2 406 aa14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 PRG3Q9Y2Y8 225 aaPredicted RBP14.71□□□□□ -0.05
CLSTN3-205ENST00000535452 LRRIQ4A6NIV6 560 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 EDIL3O43854 480 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 XRCC6P12956 609 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 SLC11A1P49279 550 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 PTENP60484 403 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 POU5F1BQ06416 359 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 NR5A1Q13285 461 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 MRPL10Q7Z7H8 261 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 NECAB1Q8N987 351 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 KREMEN2Q8NCW0 462 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 HAS1Q92839 578 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 CEP89Q96ST8 783 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 CSRNP2Q9H175 543 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 C2orf40Q9H1Z8 148 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 PIDD1Q9HB75 910 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 PARP2Q9UGN5 583 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 GIT1Q9Y2X7 761 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 STK24Q9Y6E0 443 aa14.7□□□□□ -0.06
CLSTN3-205ENST00000535452 C2CD2LO14523 706 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 NRP1O14786 923 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 SLITRK3O94933 977 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 LYPLA2O95372 231 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 GLUD1P00367 558 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms