RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 DDX53Q86TM3 631 aaKnown RBP13.44□□□□□ -0.26
SPG11-203ENST00000535302 NUP85Q9BW27 656 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 UBE4BO95155 1302 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 SCARF1Q14162 830 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 MAPK6Q16659 721 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 BEND6Q5SZJ8 279 aaPredicted RBP13.44□□□□□ -0.26
SPG11-203ENST00000535302 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 AGRPO00253 132 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 ARHGEF6Q15052 776 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 UNC13DQ70J99 1090 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 ULK4Q96C45 1275 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 LRRC63Q05C16 580 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 CENPUQ71F23 418 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
SPG11-203ENST00000535302 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 KDM5CP41229 1560 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 DPYSL4O14531 572 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 KCNH2Q12809 1159 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 SPON2Q9BUD6 331 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 THEGQ9P2T0 379 aa13.44□□□□□ -0.26
SPG11-203ENST00000535302 HMBSP08397 361 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 IRF1P10914 325 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 HSPA6P17066 643 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 SLFN12LQ6IEE8 588 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 NR1D1P20393 614 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 SKOR1P84550 965 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 NAF1Q96HR8 494 aaKnown RBP13.43□□□□□ -0.26
SPG11-203ENST00000535302 YIPF3Q9GZM5 350 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 GOLGA8QA0A0J9YX86 632 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 GOLGA8OA6NCC3 632 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 GOLGA8NF8WBI6 632 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 HUS1O60921 280 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 RECQLP46063 649 aaPredicted RBP13.43□□□□□ -0.26
SPG11-203ENST00000535302 TMEM62Q0P6H9 643 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 HSP90AA5PQ58FG0 334 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 GIPC2Q8TF65 315 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 MYCBPQ99417 103 aaPredicted RBP13.43□□□□□ -0.26
SPG11-203ENST00000535302 LXNQ9BS40 222 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 ABHD10Q9NUJ1 306 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 UTYO14607 1347 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 AKR1B1P15121 316 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 PWP1Q13610 501 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 CASP8Q14790 479 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 INTS2Q9H0H0 1204 aaKnown RBP13.43□□□□□ -0.26
SPG11-203ENST00000535302 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
SPG11-203ENST00000535302 HPCAL4Q9UM19 191 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 GYG2O15488 501 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 RCSD1Q6JBY9 416 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 FAM117BQ6P1L5 589 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 PANX2Q96RD6 677 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 ZBTB18Q99592 522 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
SPG11-203ENST00000535302 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 TBL3Q12788 808 aaKnown RBP13.42□□□□□ -0.26
SPG11-203ENST00000535302 ANGPT1Q15389 498 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 KLC2Q9H0B6 622 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 PALMDQ9NP74 551 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 HOXC10Q9NYD6 342 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 ADGRL3Q9HAR2 1447 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 USP27XA6NNY8 438 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 GOLGA8RI6L899 631 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 HMGCS2P54868 508 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 LRRC36Q1X8D7 754 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
SPG11-203ENST00000535302 UPP2O95045 317 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 TJP3O95049 919 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 TEX33O43247 280 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 APBA1Q02410 837 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 C1orf146Q5VVC0 180 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 LVRNQ6Q4G3 990 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 ELMOD1Q8N336 334 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 ASMTLO95671 621 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 VAMP7P51809 220 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 MTMR2Q13614 643 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 ATP9BO43861 1147 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
SPG11-203ENST00000535302 GNA15P30679 374 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 PHKA2P46019 1235 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 DGKHQ86XP1 1220 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 PGBD3Q8N328 593 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 EPAS1Q99814 870 aa13.42□□□□□ -0.26
SPG11-203ENST00000535302 NEO1Q92859 1461 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 F5H6K3 240 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 KLRC3Q07444 240 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 LRRC8EQ6NSJ5 796 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 PDIK1LQ8N165 341 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 EIF2AQ9BY44 585 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 ANGPTL2Q9UKU9 493 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 TTI1O43156 1089 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms