RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GLB1LQ6UWU2 654 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 TMC7Q7Z402 723 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ADHFE1Q8IWW8 467 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 SLC39A11Q8N1S5 342 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 PIGOQ8TEQ8 1089 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 IPO4Q8TEX9 1081 aaKnown RBP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 PGBD4Q96DM1 585 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 MSLNLQ96KJ4 702 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 CDCA3Q99618 268 aaPredicted RBP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 HSD17B14Q9BPX1 270 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 FOXP1Q9H334 677 aaPredicted RBP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 XPNPEP1Q9NQW7 623 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ANKEF1Q9NU02 776 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 CLEC1BQ9P126 229 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 PRKAG3Q9UGI9 489 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 RAPGEFL1Q9UHV5 662 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 PCDHB2Q9Y5E7 798 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 HIDE1A8MVS5 230 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 PI4K2BG5E9Z4 385 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 INO80B-WBP1J3KQ70 363 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 USO1O60763 962 aaKnown RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 DGAT1O75907 488 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 OR52Z1P0C646 297 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 SRGAP2BP0DMP2 458 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 TECP42680 631 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 ALDH7A1P49419 539 aaKnown RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 RARRES1P49788 294 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 PTENP60484 403 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 RNASELQ05823 741 aaKnown RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 MXD4Q14582 209 aaPredicted RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 NOMO2Q5JPE7 1267 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 TMEM31Q5JXX7 168 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 TTC38Q5R3I4 469 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 LLGL2Q6P1M3 1020 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 MAEAQ7L5Y9 396 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 FBXO18Q8NFZ0 1043 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 VN1R2Q8NFZ6 395 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 URGCPQ8TCY9 931 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 ASAP3Q8TDY4 903 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 TMEM169Q96HH4 297 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 CPB2Q96IY4 423 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 POP1Q99575 1024 aaKnown RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 GBP3Q9H0R5 595 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 POLR3FQ9H1D9 316 aaPredicted RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 NRDE2Q9H7Z3 1164 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 NGRNQ9NPE2 291 aaKnown RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 TBC1D13Q9NVG8 400 aa9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
SFSWAP-202ENST00000535202 NCOR1O75376 2440 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 TSPAN1O60635 241 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 ZNF623O75123 536 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 MED24O75448 989 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 EYA4O95677 639 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 SPATA31C1P0DKV0 1188 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 GLRA2P23416 452 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 HOXA11P31270 313 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 ARL2P36404 184 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 MBTD1Q05BQ5 628 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 NCBP1Q09161 790 aaKnown RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 COASYQ13057 564 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 CAPSQ13938 189 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 SMC1AQ14683 1233 aaKnown RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 RABEP1Q15276 862 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 UBXN11Q5T124 520 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 NOTUMQ6P988 496 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 AGMOQ6ZNB7 445 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 TMEM173Q86WV6 379 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 CATSPER3Q86XQ3 398 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 NOSTRINQ8IVI9 506 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 SMRP1Q8NCR6 262 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 ERMNQ8TAM6 284 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 RSPH1Q8WYR4 309 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 ANP32BQ92688 251 aaKnown RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 LRFN3Q9BTN0 628 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 CCDC94Q9BW85 323 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 RSAD1Q9HA92 442 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 TUFT1Q9NNX1 390 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 GPRC5CQ9NQ84 441 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 USP15Q9Y4E8 981 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 CNTNAP2Q9UHC6 1331 aa9.48□□□□□ -0.89
SFSWAP-202ENST00000535202 C2orf71A6NGG8 1288 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 C19orf67A6NJJ6 358 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 DCXO43602 365 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 ST18O60284 1047 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 POMCP01189 267 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 GALTP07902 379 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 ITGA4P13612 1032 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 ALADP13716 330 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 AXLP30530 894 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 TRAPPC10P48553 1259 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 SLC11A1P49279 550 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 BMS1Q14692 1282 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 ANKRD54Q6NXT1 300 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms