RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 PPME1Q9Y570 386 aa5.63□□□□□ -1.51
USH1C-210ENST00000534556 TECTAO75443 2155 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 HIDE1A8MVS5 230 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 H3BQV1 296 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 ABLIM1O14639 778 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 FSCN2O14926 492 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 GAS2O43903 313 aaKnown RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 DKC1O60832 514 aaKnown RBP eCLIP5.62□□□□□ -1.51
USH1C-210ENST00000534556 TBX10O75333 385 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 FGF18O76093 207 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 EYA4O95677 639 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 EOMESO95936 686 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 EFEMP2O95967 443 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 RB1P06400 928 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 STAG3L1P0CL83 205 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 ZSCAN20P17040 1043 aaPredicted RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 MARCKSP29966 332 aaPredicted RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 SLC12A3P55017 1021 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 POU5F1BQ06416 359 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 RAD51AP2Q09MP3 1159 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 GNL2Q13823 731 aaKnown RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 KCNC3Q14003 757 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 NAB2Q15742 525 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 NAALADL2Q58DX5 795 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 RILPL1Q5EBL4 403 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 CDCA2Q69YH5 1023 aaPredicted RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 TWF2Q6IBS0 349 aaKnown RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 DTHD1Q6ZMT9 781 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 TAS1R1Q7RTX1 841 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 SLC39A11Q8N1S5 342 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 SPRYD3Q8NCJ5 442 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 TCP11Q8WWU5 503 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 AUTS2Q8WXX7 1259 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 RABGGTAQ92696 567 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 P2RX5Q93086 422 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 EPSTI1Q96J88 318 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 ZBTB45Q96K62 511 aaPredicted RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 ZFP42Q96MM3 310 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 SCLT1Q96NL6 688 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 SAMD11Q96NU1 681 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 CLIC6Q96NY7 704 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 ASB2Q96Q27 587 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 NACC1Q96RE7 527 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 USP28Q96RU2 1077 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 PAAF1Q9BRP4 392 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 HAPLN2Q9GZV7 340 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 IKZF4Q9H2S9 585 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 FZD8Q9H461 694 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 NXF3Q9H4D5 531 aaKnown RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 PDZD7Q9H5P4 517 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 TBC1D13Q9NVG8 400 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 CLEC1BQ9P126 229 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 CDH22Q9UJ99 828 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 FBXO2Q9UK22 296 aaPredicted RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 LRFN2Q9ULH4 789 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 NOL7Q9UMY1 257 aaKnown RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 IPPQ9Y573 584 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.62□□□□□ -1.51
USH1C-210ENST00000534556 PCDHB2Q9Y5E7 798 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 OBSL1O75147 1896 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 GREB1Q4ZG55 1949 aa5.62□□□□□ -1.51
USH1C-210ENST00000534556 A0A1B0GUA9 196 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 ARHGEF35A5YM69 484 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 GRXCR2A6NFK2 248 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 LRRIQ4A6NIV6 560 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 H3BQ06 376 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 INO80B-WBP1J3KQ70 363 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 PTGESO14684 152 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 PER2O15055 1255 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 INPPL1O15357 1258 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 ASAP2O43150 1006 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 GTPBP6O43824 516 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 HIP1RO75146 1068 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 NPTXRO95502 500 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 POMCP01189 267 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 GALTP07902 379 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 DMDP11532 3685 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 IL9P15248 144 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 NCLP19338 710 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 MUTP22033 750 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 SFPQP23246 707 aaKnown RBP eCLIP5.61□□□□□ -1.51
USH1C-210ENST00000534556 AKAP5P24588 427 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 NPTX2P47972 431 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 SLC11A1P49279 550 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 BCAR1P56945 870 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 CACNB1Q02641 598 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 CEBPZQ03701 1054 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 ADAM15Q13444 863 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 MCM6Q14566 821 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 MXD4Q14582 209 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 ZNF638Q14966 1978 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 KARSQ15046 597 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 ZNF318Q5VUA4 2279 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 FOXD4L5Q5VV16 416 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 KANK3Q6NY19 840 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 CD300LGQ6UXG3 332 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 PPP4R3CPQ6ZMV5 832 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms