RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	P2RX7	Q99572	595 aa	Known RBP	7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	LBHD1	Q9BQE6	289 aa	Predicted RBP	7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	PLCD4	Q9BRC7	762 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	SIL1	Q9H173	461 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	PORCN	Q9H237	461 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	RBPJL	Q9UBG7	517 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	ABCF2	Q9UG63	623 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	DOCK3	Q8IZD9	2030 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	ZNF521	Q96K83	1311 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	XIRP2	A4UGR9	3374 aa		7.43	□□□□□ -1.22
PICALM-223	ENST00000534412	C19orf81	C9J6K1	198 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	MSC	O60682	206 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	ASNS	P08243	561 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	HOXC6	P09630	235 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	SDHB	P21912	280 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	VAMP1	P23763	118 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	RACK1	P63244	317 aa	Known RBP	7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	SMAD3	P84022	425 aa	Known RBP	7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	CYP4F8	P98187	520 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	TCEAL1	Q15170	157 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	ANKRD39	Q53RE8	183 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	HLA-DQA1	Q5Y7H0	255 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	UNC5A	Q6ZN44	842 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	PLEKHH3	Q7Z736	793 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	JAML	Q86YT9	394 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	NUP43	Q8NFH3	380 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	LPAR1	Q92633	364 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	DHX36	Q9H2U1	1008 aa	Known RBP	7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	TTYH1	Q9H313	450 aa	Predicted RBP	7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	DNAJC18	Q9H819	358 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	GINM1	Q9NU53	330 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	FAM86C1	Q9NVL1	165 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	TMOD4	Q9NZQ9	345 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	SF3B6	Q9Y3B4	125 aa	Known RBP	7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	IRAK3	Q9Y616	596 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	SLC12A7	Q9Y666	1083 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	LTBP2	Q14767	1821 aa		7.42	□□□□□ -1.22
PICALM-223	ENST00000534412	AK9	Q5TCS8	1911 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	MYH2	Q9UKX2	1941 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	EFEMP2	O95967	443 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	ITGA4	P13612	1032 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	ERVFRD-1	P60508	538 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	GSTO1	P78417	241 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	PAK2	Q13177	524 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	MVP	Q14764	893 aa	Known RBP	7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	SHH	Q15465	462 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	C9orf50	Q5SZB4	431 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	SLCO6A1	Q86UG4	719 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	TMEM151B	Q8IW70	566 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	SSH1	Q8WYL5	1049 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	SIGLEC10	Q96LC7	697 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	C12orf42	Q96LP6	360 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	GP6	Q9HCN6	339 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	GCM1	Q9NP62	436 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	FLRT1	Q9NZU1	646 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	PI4KB	Q9UBF8	816 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	DDX20	Q9UHI6	824 aa	Known RBP	7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	MBD1	Q9UIS9	605 aa	Predicted RBP	7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	KCTD3	Q9Y597	815 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412	SIPA1L1	O43166	1804 aa		7.41	□□□□□ -1.22
PICALM-223	ENST00000534412		A0A1B0GUL7	405 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412		A0A1W2PQJ5	194 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	CNMD	O75829	334 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	LDHC	P07864	332 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	UBTFL1	P0CB47	393 aa	Predicted RBP	7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	CYBA	P13498	195 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	CD247	P20963	164 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	VIPR1	P32241	457 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	GRB14	Q14449	540 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	RAB3GAP1	Q15042	981 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	TCERG1L	Q5VWI1	586 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	MFSD14C	Q5VZR4	134 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	LBX2	Q6XYB7	198 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	RUFY4	Q6ZNE9	571 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	PPFIBP1	Q86W92	1011 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	LSR	Q86X29	649 aa	Predicted RBP	7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	SPATA5	Q8NB90	893 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	BRF1	Q92994	677 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	HMG20B	Q9P0W2	317 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	ZBTB21	Q9ULJ3	1066 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	PA2G4	Q9UQ80	394 aa	Known RBP	7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	RABGAP1	Q9Y3P9	1069 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	FHOD1	Q9Y613	1164 aa		7.4	□□□□□ -1.22
PICALM-223	ENST00000534412	FRMPD3	Q5JV73	1810 aa		7.4	□□□□□ -1.23
PICALM-223	ENST00000534412	ATAD5	Q96QE3	1844 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	FLT1	P17948	1338 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	SLC15A5	A6NIM6	579 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412		H0Y8X5	98 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	SHOX	O15266	292 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	GLRX3	O76003	335 aa	Known RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	RECK	O95980	971 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	FOSL2	P15408	326 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	ZNF445	P59923	1031 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	TIMM10	P62072	90 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	YBX1	P67809	324 aa	Known RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	CCNA1	P78396	465 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	POU4F1	Q01851	419 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	ZYX	Q15942	572 aa	Known RBP	7.39	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms