RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 LAMTOR5O43504 91 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 TOX4O94842 621 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 C5AR1P21730 350 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 KIR2DL3P43628 341 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 BPIFB4P59827 614 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 RAC3P60763 192 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 UBE3CQ15386 1083 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 SURF1Q15526 300 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 ANO4Q32M45 955 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 ZFYVE27Q5T4F4 411 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 BTNL9Q6UXG8 535 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 ABHD15Q6UXT9 468 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
CASP4-213ENST00000534356 ANKRD53Q8N9V6 530 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 NEIL1Q96FI4 390 aaPredicted RBP8.53□□□□□ -1.04
CASP4-213ENST00000534356 RPL10LQ96L21 214 aaKnown RBP8.53□□□□□ -1.04
CASP4-213ENST00000534356 SLC6A15Q9H2J7 730 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 C14orf93Q9H972 538 aaKnown RBP8.53□□□□□ -1.04
CASP4-213ENST00000534356 JADE2Q9NQC1 790 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 ING3Q9NXR8 418 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 PUF60Q9UHX1 559 aaKnown RBP8.53□□□□□ -1.04
CASP4-213ENST00000534356 SCOCQ9UIL1 159 aa8.53□□□□□ -1.04
CASP4-213ENST00000534356 HOXA5P20719 270 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 ADAM8P78325 824 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 FZD5Q13467 585 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 TBC1D10BQ4KMP7 808 aaPredicted RBP8.52□□□□□ -1.05
CASP4-213ENST00000534356 UBXN11Q5T124 520 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 TAS1R1Q7RTX1 841 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 LRRC37BQ96QE4 947 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 LMF1Q96S06 567 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 DPYSL5Q9BPU6 564 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 MEGF9Q9H1U4 602 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 SEC61A2Q9H9S3 476 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 DMRT3Q9NQL9 472 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 TUBD1Q9UJT1 453 aa8.52□□□□□ -1.05
CASP4-213ENST00000534356 NDUFS2O75306 463 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 ALDH1A2O94788 518 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 SNUPNO95149 360 aaKnown RBP8.51□□□□□ -1.05
CASP4-213ENST00000534356 LTA4HP09960 611 aaKnown RBP8.51□□□□□ -1.05
CASP4-213ENST00000534356 VSIG10L2P0DP72 767 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 CTSSP25774 331 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 MALLQ13021 153 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 MUM1L1Q5H9M0 696 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 EFCAB2Q5VUJ9 269 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 GPHA2Q96T91 129 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 C12orf65Q9H3J6 166 aaKnown RBP8.51□□□□□ -1.05
CASP4-213ENST00000534356 GREM2Q9H772 168 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 PPP4R1LQ9P1A2 415 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 OAZ3Q9UMX2 235 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 G3BP2Q9UN86 482 aaKnown RBP8.51□□□□□ -1.05
CASP4-213ENST00000534356 LUC7L2Q9Y383 392 aaKnown RBP8.51□□□□□ -1.05
CASP4-213ENST00000534356 MROH2BQ7Z745 1585 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 ZNF536O15090 1300 aa8.51□□□□□ -1.05
CASP4-213ENST00000534356 A0A0G2JLL6 359 aaPredicted RBP8.5□□□□□ -1.05
CASP4-213ENST00000534356 PRAMEF4O60810 478 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 PLATP00750 562 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 RECQLP46063 649 aaPredicted RBP8.5□□□□□ -1.05
CASP4-213ENST00000534356 RAB27AP51159 221 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 EPHB1P54762 984 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 MEF2AQ02078 507 aaPredicted RBP8.5□□□□□ -1.05
CASP4-213ENST00000534356 PPP3CAQ08209 521 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 SAFB2Q14151 953 aaKnown RBP eCLIP8.5□□□□□ -1.05
CASP4-213ENST00000534356 LCE1DQ5T752 114 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 SLFN13Q68D06 897 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 JDP2Q8WYK2 163 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 RIN2Q8WYP3 895 aaPredicted RBP8.5□□□□□ -1.05
CASP4-213ENST00000534356 RABGGTAQ92696 567 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 PAWRQ96IZ0 340 aaKnown RBP8.5□□□□□ -1.05
CASP4-213ENST00000534356 TEPSINQ96N21 525 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 KLHL42Q9P2K6 505 aa8.5□□□□□ -1.05
CASP4-213ENST00000534356 SLC26A4O43511 780 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 AKAP10O43572 662 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 CDC14BO60729 498 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 JUNP05412 331 aaKnown RBP8.49□□□□□ -1.05
CASP4-213ENST00000534356 CR2P20023 1033 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 MCAMP43121 646 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 KRT40Q6A162 431 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 TTLL10Q6ZVT0 673 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 GPR156Q8NFN8 814 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 SNX33Q8WV41 574 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 GNRHR2Q96P88 292 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 AGO3Q9H9G7 860 aaKnown RBP8.49□□□□□ -1.05
CASP4-213ENST00000534356 TLR9Q9NR96 1032 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 IP6K2Q9UHH9 426 aa8.49□□□□□ -1.05
CASP4-213ENST00000534356 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 MTSS1O43312 755 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 ZRANB2O95218 330 aaKnown RBP eCLIP8.48□□□□□ -1.05
CASP4-213ENST00000534356 GSPT1P15170 499 aaKnown RBP8.48□□□□□ -1.05
CASP4-213ENST00000534356 GAGE13Q4V321 117 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 C19orf54Q5BKX5 351 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 TAX1BP1Q86VP1 789 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 CMTR2Q8IYT2 770 aaKnown RBP8.48□□□□□ -1.05
CASP4-213ENST00000534356 GPR135Q8IZ08 494 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 CPA6Q8N4T0 437 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 C20orf173Q96LM9 149 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 ADI1Q9BV57 179 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 ZBTB21Q9ULJ3 1066 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 DNM3Q9UQ16 869 aa8.48□□□□□ -1.05
CASP4-213ENST00000534356 RPTORQ8N122 1335 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms