RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 MBTD1Q05BQ5 628 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
SF3B2-215ENST00000534307 AMHR2Q16671 573 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 SLC39A11Q8N1S5 342 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 EFHBQ8N7U6 833 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 MRPS27Q92552 414 aaKnown RBP15.63■□□□□ 0.09
SF3B2-215ENST00000534307 MSLNLQ96KJ4 702 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 ZNF558Q96NG5 402 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 NOL7Q9UMY1 257 aaKnown RBP15.63■□□□□ 0.09
SF3B2-215ENST00000534307 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 USO1O60763 962 aaKnown RBP15.62■□□□□ 0.09
SF3B2-215ENST00000534307 MUTP22033 750 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 NRIP1P48552 1158 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 MCM2P49736 904 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 BCAR1P56945 870 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 TFDP1Q14186 410 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 ECM1Q16610 540 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 PDE12Q6L8Q7 609 aaKnown RBP15.62■□□□□ 0.09
SF3B2-215ENST00000534307 GLB1LQ6UWU2 654 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 AGMOQ6ZNB7 445 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 IGSF22Q8N9C0 903 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 ERMNQ8TAM6 284 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 PPP2R3CQ969Q6 453 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 NACC1Q96RE7 527 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 POLR3FQ9H1D9 316 aaPredicted RBP15.62■□□□□ 0.09
SF3B2-215ENST00000534307 IGFLR1Q9H665 355 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 TBC1D13Q9NVG8 400 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 SPG21Q9NZD8 308 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 CLEC1BQ9P126 229 aa15.62■□□□□ 0.09
SF3B2-215ENST00000534307 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 B4GALT3O60512 393 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 AXLP30530 894 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 PTGDRQ13258 359 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 IL17AQ16552 155 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 DUSP6Q16828 381 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 LONRF3Q496Y0 759 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 NOMO2Q5JPE7 1267 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 EP400NLQ6ZTU2 488 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 SMG8Q8ND04 991 aaKnown RBP15.61■□□□□ 0.09
SF3B2-215ENST00000534307 MCPH1Q8NEM0 835 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 CCDC51Q96ER9 411 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 CCDC43Q96MW1 224 aaKnown RBP15.61■□□□□ 0.09
SF3B2-215ENST00000534307 GPRC5CQ9NQ84 441 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.61■□□□□ 0.09
SF3B2-215ENST00000534307 KIF3AQ9Y496 699 aa15.61■□□□□ 0.09
SF3B2-215ENST00000534307 INPPL1O15357 1258 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 ERLIN2O94905 339 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 EYA4O95677 639 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 NCLP19338 710 aaKnown RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 GJB2P29033 226 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 AFF1P51825 1210 aaKnown RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 KCNC3Q14003 757 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 PDIA5Q14554 519 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 SMAD2Q15796 467 aaKnown RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 HAUS3Q68CZ6 603 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 CDCA2Q69YH5 1023 aaPredicted RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 NOTUMQ6P988 496 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 RBM23Q86U06 439 aaKnown RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 TMEM173Q86WV6 379 aaPredicted RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 VN1R2Q8NFZ6 395 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 PGBD4Q96DM1 585 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 CDCA3Q99618 268 aaPredicted RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 TCF25Q9BQ70 676 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 NRDE2Q9H7Z3 1164 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 TLE6Q9H808 572 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 PUF60Q9UHX1 559 aaKnown RBP15.6■□□□□ 0.09
SF3B2-215ENST00000534307 PLXNA3P51805 1871 aa15.6■□□□□ 0.09
SF3B2-215ENST00000534307 RIF1Q5UIP0 2472 aaKnown RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 HIDE1A8MVS5 230 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 INO80B-WBP1J3KQ70 363 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 LAD1O00515 517 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 B4GALT5O43286 388 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 MBTPS2O43462 519 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 ARF4P18085 180 aaPredicted RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 CYP11B2P19099 503 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 PRPHP41219 470 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 ALDH7A1P49419 539 aaKnown RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 KRT17Q04695 432 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 COASYQ13057 564 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 SMAD4Q13485 552 aaKnown RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 CLUL1Q15846 466 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 PLPP4Q5VZY2 271 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 ZNF280BQ86YH2 543 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 SMRP1Q8NCR6 262 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 PRSS33Q8NF86 280 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 MICAL1Q8TDZ2 1067 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 BCL7CQ8WUZ0 217 aaPredicted RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 BSNDQ8WZ55 320 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 CPB2Q96IY4 423 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 EIF2AQ9BY44 585 aaKnown RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 CSRNP2Q9H175 543 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 RSAD1Q9HA92 442 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 NGRNQ9NPE2 291 aaKnown RBP15.59■□□□□ 0.09
SF3B2-215ENST00000534307 LRWD1Q9UFC0 647 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 PRKAG3Q9UGI9 489 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 CD207Q9UJ71 328 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 FAM50BQ9Y247 325 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 INPP5FQ9Y2H2 1132 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 IPPQ9Y573 584 aa15.59■□□□□ 0.09
SF3B2-215ENST00000534307 CNTNAP2Q9UHC6 1331 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms