RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 HOXB8P17481 243 aaPredicted RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 CA8P35219 290 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 POU5F1BQ06416 359 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 TFDP1Q14186 410 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 PCBP1Q15365 356 aaKnown RBP eCLIP9.92□□□□□ -0.82
COPB1-211ENST00000534234 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 UBXN11Q5T124 520 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 SYCE2Q6PIF2 218 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 DDX53Q86TM3 631 aaKnown RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 TMEM173Q86WV6 379 aaPredicted RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 ZNF280BQ86YH2 543 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 VPS52Q8N1B4 723 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 TMEM87AQ8NBN3 555 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 CNNM3Q8NE01 707 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 URGCPQ8TCY9 931 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 SUSD6Q92537 303 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 IGSF21Q96ID5 467 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 RPGRIP1Q96KN7 1286 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 ZSCAN31Q96LW9 406 aaPredicted RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 LLPHQ9BRT6 129 aaKnown RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 APOL5Q9BWW9 433 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 PHF7Q9BWX1 381 aaPredicted RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 S1PR5Q9H228 398 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 RSAD1Q9HA92 442 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 KANSL3Q9P2N6 904 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 DNAJB4Q9UDY4 337 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 MUTYHQ9UIF7 546 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 EVPLQ92817 2033 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 POTEMA6NI47 508 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 LOC730098B7Z3J9 87 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 INO80B-WBP1J3KQ70 363 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 DDHD2O94830 711 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 SPATA31C1P0DKV0 1188 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 AXLP30530 894 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 ARL2P36404 184 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 RARRES1P49788 294 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 AFF1P51825 1210 aaKnown RBP9.91□□□□□ -0.82
COPB1-211ENST00000534234 ZNF174Q15697 407 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 CATSPER3Q86XQ3 398 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 FBXO18Q8NFZ0 1043 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 ASAP3Q8TDY4 903 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 AUTS2Q8WXX7 1259 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 CASP10Q92851 521 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 FAM122AQ96E09 287 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 FAM193BQ96PV7 902 aaPredicted RBP9.91□□□□□ -0.82
COPB1-211ENST00000534234 FOXP1Q9H334 677 aaPredicted RBP9.91□□□□□ -0.82
COPB1-211ENST00000534234 CNTNAP2Q9UHC6 1331 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 ARIH1Q9Y4X5 557 aaPredicted RBP9.91□□□□□ -0.82
COPB1-211ENST00000534234 HCFC2Q9Y5Z7 792 aa9.91□□□□□ -0.82
COPB1-211ENST00000534234 MYH9P35579 1960 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 B4GALT3O60512 393 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 TSPAN1O60635 241 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 CLASP2O75122 1294 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 POMCP01189 267 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 CTSAP10619 480 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 ITGA4P13612 1032 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 NCLP19338 710 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 GLRA2P23416 452 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 PLA2G5P39877 138 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 SLC11A1P49279 550 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 RBM25P49756 843 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 HMGN5P82970 282 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 CAPSQ13938 189 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 GIT2Q14161 759 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 CBX2Q14781 532 aaPredicted RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 NOTUMQ6P988 496 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 MAEAQ7L5Y9 396 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 FAM184AQ8NB25 1140 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 BCL7CQ8WUZ0 217 aaPredicted RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 CPB2Q96IY4 423 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 KIF2CQ99661 725 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
COPB1-211ENST00000534234 ZBP1Q9H171 429 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 CSRNP2Q9H175 543 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 TUFT1Q9NNX1 390 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 UBN1Q9NPG3 1134 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 FAN1Q9Y2M0 1017 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 IPPQ9Y573 584 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 IRAK3Q9Y616 596 aa9.9□□□□□ -0.82
COPB1-211ENST00000534234 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
COPB1-211ENST00000534234 USO1O60763 962 aaKnown RBP9.89□□□□□ -0.83
COPB1-211ENST00000534234 MED24O75448 989 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 MBTD1Q05BQ5 628 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 GNL2Q13823 731 aaKnown RBP9.89□□□□□ -0.83
COPB1-211ENST00000534234 TPRNQ4KMQ1 711 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 CES5AQ6NT32 575 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 EDAQ92838 391 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 CCDC51Q96ER9 411 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 TMEM175Q9BSA9 504 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 POLR3CQ9BUI4 534 aaPredicted RBP9.89□□□□□ -0.83
COPB1-211ENST00000534234 NFKBIZQ9BYH8 718 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 POLR3FQ9H1D9 316 aaPredicted RBP9.89□□□□□ -0.83
COPB1-211ENST00000534234 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
COPB1-211ENST00000534234 HES2Q9Y543 173 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 LOXHD1Q8IVV2 1947 aa9.89□□□□□ -0.83
COPB1-211ENST00000534234 ARL5CA6NH57 179 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms