RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 FTHL17Q9BXU8 183 aa12.99□□□□□ -0.33
CTSC-209ENST00000534131 IFIH1Q9BYX4 1025 aaKnown RBP12.99□□□□□ -0.33
CTSC-209ENST00000534131 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
CTSC-209ENST00000534131 IFT122Q9HBG6 1241 aa12.99□□□□□ -0.33
CTSC-209ENST00000534131 TBC1D7Q9P0N9 293 aa12.99□□□□□ -0.33
CTSC-209ENST00000534131 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
CTSC-209ENST00000534131 DENND3A2RUS2 1198 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 EFCAB14O75071 495 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 RHOBTB3O94955 611 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 PRKCBP05771 671 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 CSF2RAP15509 400 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
CTSC-209ENST00000534131 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
CTSC-209ENST00000534131 STIM1Q13586 685 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 IKBKEQ14164 716 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 LPIN1Q14693 890 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 FAM187BQ17R55 369 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 CCDC183Q5T5S1 534 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 CNKSR3Q6P9H4 555 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 ZNF720Q7Z2F6 126 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 BICD1Q96G01 975 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 ACCSQ96QU6 501 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 ADPGKQ9BRR6 497 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 WNT8AQ9H1J5 351 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 MTIF3Q9H2K0 278 aaKnown RBP12.98□□□□□ -0.33
CTSC-209ENST00000534131 ST6GALNAC4Q9H4F1 302 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 IL23AQ9NPF7 189 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 PADI3Q9ULW8 664 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 NOC2LQ9Y3T9 749 aaKnown RBP12.98□□□□□ -0.33
CTSC-209ENST00000534131 PCDHA5Q9Y5H7 936 aa12.98□□□□□ -0.33
CTSC-209ENST00000534131 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
CTSC-209ENST00000534131 TET1Q8NFU7 2136 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 UBE4BO95155 1302 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 ACKR2O00590 384 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 EIF3DO15371 548 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTSC-209ENST00000534131 KLRC4O43908 158 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 NBNO60934 754 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 LETM1O95202 739 aaPredicted RBP12.97□□□□□ -0.33
CTSC-209ENST00000534131 FGBP02675 491 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 CXCL10P02778 98 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 CD52P31358 61 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 PPP1R2P41236 205 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTSC-209ENST00000534131 GTF2BQ00403 316 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 MBTD1Q05BQ5 628 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
CTSC-209ENST00000534131 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
CTSC-209ENST00000534131 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 PSRC1Q6PGN9 363 aaPredicted RBP12.97□□□□□ -0.33
CTSC-209ENST00000534131 TRAF7Q6Q0C0 670 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 FAM228AQ86W67 206 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 TMEM161BQ8NDZ6 487 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
CTSC-209ENST00000534131 FZD8Q9H461 694 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 SLC39A2Q9NP94 309 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
CTSC-209ENST00000534131 N4BP3O15049 544 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 SKIP12755 728 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 LIG4P49917 911 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 PLEKHG4Q58EX7 1191 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 ZNF658Q5TYW1 1059 aaPredicted RBP12.96□□□□□ -0.33
CTSC-209ENST00000534131 DBF4BQ8NFT6 615 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 CCDC51Q96ER9 411 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 ERVK-5Q9HDB9 667 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 C1orf112Q9NSG2 853 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 TBX20Q9UMR3 447 aa12.96□□□□□ -0.33
CTSC-209ENST00000534131 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
CTSC-209ENST00000534131 CITO14578 2027 aa12.96□□□□□ -0.34
CTSC-209ENST00000534131 ABHD14A-ACY1A0A1B0GW23 586 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
CTSC-209ENST00000534131 BAIAP3O94812 1187 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 FGFR4P22455 802 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 ITGB8P26012 769 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 KCNJ6P48051 423 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 PSEN1P49768 467 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
CTSC-209ENST00000534131 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 TWF2Q6IBS0 349 aaKnown RBP12.95□□□□□ -0.34
CTSC-209ENST00000534131 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 CAVIN1Q6NZI2 390 aaKnown RBP12.95□□□□□ -0.34
CTSC-209ENST00000534131 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 HACE1Q8IYU2 909 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 MYOCDQ8IZQ8 938 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 SPATA20Q8TB22 786 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
CTSC-209ENST00000534131 KCNN1Q92952 543 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
CTSC-209ENST00000534131 CCDC113Q9H0I3 377 aa12.95□□□□□ -0.34
CTSC-209ENST00000534131 MINDY3Q9H8M7 445 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms