RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 RESP18Q5W5W9 173 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 SHC4Q6S5L8 630 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 ARHGAP27Q6ZUM4 889 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 HOMER1Q86YM7 354 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 ADGRF4Q8IZF3 695 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 CNPY4Q8N129 248 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 PIBF1Q8WXW3 757 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 TMX1Q9H3N1 280 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 SH2D4AQ9H788 454 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 GRPEL1Q9HAV7 217 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 FANCLQ9NW38 375 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 TJP2Q9UDY2 1190 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 PCDHA6Q9UN73 950 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 PCDHB6Q9Y5E3 794 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 PCDHA8Q9Y5H6 950 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 PPP2R3BQ9Y5P8 575 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 A0A0G2JMZ2 1700 aa6.45□□□□□ -1.38
CHKA-208ENST00000533910 A0A0A0MRY4 1105 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 CCDC194A0A1B0GVG4 234 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 H7C1D1 291 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 CTAGE5O15320 804 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 PLA2G6O60733 806 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 KINO60870 393 aaKnown RBP6.44□□□□□ -1.38
CHKA-208ENST00000533910 SLFN14P0C7P3 912 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 BMP3P12645 472 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 XRCC6P12956 609 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHKA-208ENST00000533910 PFKFB1P16118 471 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 MARCKSP29966 332 aaPredicted RBP6.44□□□□□ -1.38
CHKA-208ENST00000533910 ECE1P42892 770 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 ADCY7P51828 1080 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 NDUFA8P51970 172 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 ID3Q02535 119 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 RING1Q06587 406 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 ORC2Q13416 577 aaPredicted RBP6.44□□□□□ -1.38
CHKA-208ENST00000533910 SQSTM1Q13501 440 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 CDC37Q16543 378 aaPredicted RBP6.44□□□□□ -1.38
CHKA-208ENST00000533910 NKG7Q16617 165 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 KIAA1755Q5JYT7 1200 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 PIK3AP1Q6ZUJ8 805 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 KCTD1Q719H9 257 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 MIGA2Q7L4E1 593 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 NLRC3Q7RTR2 1065 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 AGGF1Q8N302 714 aaeCLIP6.44□□□□□ -1.38
CHKA-208ENST00000533910 ACER1Q8TDN7 264 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 FERMT2Q96AC1 680 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 HOOK2Q96ED9 719 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 TIGD1Q96MW7 591 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 TM9SF2Q99805 663 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 WNT10AQ9GZT5 417 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 DEFB129Q9H1M3 183 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 TNMDQ9H2S6 317 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 TSPY26PQ9H489 355 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 VCPKMTQ9H867 229 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 C6orf50Q9HD87 102 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 DISC1Q9NRI5 854 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 GMIPQ9P107 970 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 ZNF112Q9UJU3 913 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 AP4E1Q9UPM8 1137 aa6.44□□□□□ -1.38
CHKA-208ENST00000533910 SRPRBQ9Y5M8 271 aaKnown RBP6.44□□□□□ -1.38
CHKA-208ENST00000533910 A0A1B0GVL5 298 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 SMCO2A6NFE2 343 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 CTNND1O60716 968 aaKnown RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 PTMAP06454 111 aaKnown RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 NTF4P34130 210 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 SLC16A2P36021 539 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 EPS15P42566 896 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 GRIN1Q05586 938 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 IFRD2Q12894 506 aaPredicted RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 NONOQ15233 471 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHKA-208ENST00000533910 C21orf62-AS1Q17RA5 79 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 QRICH1Q2TAL8 776 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 EXOSC6Q5RKV6 272 aaKnown RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 ZBTB37Q5TC79 503 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 SYDE2Q5VT97 1194 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 ANGEL2Q5VTE6 544 aaKnown RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 ARL6IP4Q66PJ3 421 aaKnown RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 ACAD11Q709F0 780 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 ELOA2Q8IYF1 753 aaPredicted RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 C4orf32Q8N8J7 132 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 FANCD2OSQ96PS1 177 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 RUSC1Q9BVN2 902 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 GLT8D2Q9H1C3 349 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 RIC8AQ9NPQ8 531 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 ADARB2Q9NS39 739 aaKnown RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 GGA3Q9NZ52 723 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 RNF181Q9P0P0 153 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 SMCHD1A6NHR9 2005 aa6.43□□□□□ -1.38
CHKA-208ENST00000533910 COL11A1P12107 1806 aaPredicted RBP6.43□□□□□ -1.38
CHKA-208ENST00000533910 C9orf172C9J069 976 aa6.42□□□□□ -1.38
CHKA-208ENST00000533910 TMEM232C9JQI7 657 aa6.42□□□□□ -1.38
CHKA-208ENST00000533910 LAD1O00515 517 aa6.42□□□□□ -1.38
CHKA-208ENST00000533910 WDR46O15213 610 aaKnown RBP6.42□□□□□ -1.38
CHKA-208ENST00000533910 DDNO94850 711 aaPredicted RBP6.42□□□□□ -1.38
CHKA-208ENST00000533910 ALX3O95076 343 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms