RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 GIT1Q9Y2X7 761 aa10.65□□□□□ -0.7
FOXRED1-216ENST00000533839 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.7
FOXRED1-216ENST00000533839 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 K7ERI5 159 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 ZC3H11AO75152 810 aaKnown RBP eCLIP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 CXCL14O95715 111 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 GLRA2P23416 452 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 SSTR3P32745 418 aaPredicted RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 CA8P35219 290 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 NAMPTP43490 491 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 NRIP1P48552 1158 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 COL19A1Q14993 1142 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 CTC1Q2NKJ3 1217 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 LRRC55Q6ZSA7 311 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 DDX53Q86TM3 631 aaKnown RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 IGSF22Q8N9C0 903 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 TCF25Q9BQ70 676 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 TMEM175Q9BSA9 504 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 TIPINQ9BVW5 301 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 COLEC11Q9BWP8 271 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 BHMT2Q9H2M3 363 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 MINDY3Q9H8M7 445 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 C17orf75Q9HAS0 396 aa10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 DDX19AQ9NUU7 478 aaKnown RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
FOXRED1-216ENST00000533839 A0A087WWV3 80 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 A0A1B0GUA9 196 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 WNT7AO00755 349 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 N4BP3O15049 544 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 CSPG5O95196 566 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 EYA4O95677 639 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 GALTP07902 379 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 ALADP13716 330 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 HOXB8P17481 243 aaPredicted RBP10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 UBA7P41226 1012 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 TOB1P50616 345 aaPredicted RBP10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 SMTNP53814 917 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 ERVFC1P60507 584 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 PRPF4BQ13523 1007 aaKnown RBP10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 CAPSQ13938 189 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 CAMK1Q14012 370 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 FAM187BQ17R55 369 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 LONRF3Q496Y0 759 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 ELMSAN1Q6PJG2 1045 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 PPFIBP1Q86W92 1011 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 FAM178BQ8IXR5 827 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 GJD3Q8N144 294 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 SLC39A11Q8N1S5 342 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 MRPL43Q8N983 215 aaKnown RBP10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 ASAP3Q8TDY4 903 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 LPPQ93052 612 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 CALML4Q96GE6 196 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 AK8Q96MA6 479 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 DRC1Q96MC2 740 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 BACH2Q9BYV9 841 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 GBP3Q9H0R5 595 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 RNF19AQ9NV58 838 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 TBC1D13Q9NVG8 400 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 PARP2Q9UGN5 583 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 DPP7Q9UHL4 492 aa10.63□□□□□ -0.71
FOXRED1-216ENST00000533839 CCDC169A6NNP5 214 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 H0YCG3 227 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 ACKR2O00590 384 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 TSPAN1O60635 241 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 ATF7P17544 494 aaPredicted RBP10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 DNAJB1P25685 340 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 IRS1P35568 1242 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 ATP2C1P98194 919 aaPredicted RBP10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 MBTD1Q05BQ5 628 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 SMAD4Q13485 552 aaKnown RBP10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 DUSP6Q16828 381 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 TPRNQ4KMQ1 711 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 PLPP4Q5VZY2 271 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 CES5AQ6NT32 575 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 AGMOQ6ZNB7 445 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 VPS52Q8N1B4 723 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 RASSF8Q8NHQ8 419 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 CASP10Q92851 521 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 INTS4Q96HW7 963 aaKnown RBP10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 IGSF21Q96ID5 467 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 CPB2Q96IY4 423 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 RPS6KC1Q96S38 1066 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 EMILIN2Q9BXX0 1053 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 FZD8Q9H461 694 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 NRDE2Q9H7Z3 1164 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 KCND2Q9NZV8 630 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 IPPQ9Y573 584 aa10.62□□□□□ -0.71
FOXRED1-216ENST00000533839 SIP14410 1827 aa10.61□□□□□ -0.71
FOXRED1-216ENST00000533839 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
FOXRED1-216ENST00000533839 VWA3AA6NCI4 1184 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms