RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.7
VPS51-213ENST00000533827 ARL2P36404 184 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 PLA2G5P39877 138 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 RARRES1P49788 294 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 RNASELQ05823 741 aaKnown RBP19.4■□□□□ 0.7
VPS51-213ENST00000533827 POU5F1BQ06416 359 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 SAFBQ15424 915 aaKnown RBP eCLIP19.4■□□□□ 0.7
VPS51-213ENST00000533827 LLGL2Q6P1M3 1020 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 DDX53Q86TM3 631 aaKnown RBP19.4■□□□□ 0.7
VPS51-213ENST00000533827 ZNF280BQ86YH2 543 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 VPS52Q8N1B4 723 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 BCL7CQ8WUZ0 217 aaPredicted RBP19.4■□□□□ 0.7
VPS51-213ENST00000533827 KIF2CQ99661 725 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 ZBP1Q9H171 429 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 RSAD1Q9HA92 442 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 HCFC2Q9Y5Z7 792 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 IRAK3Q9Y616 596 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 CNTNAP2Q9UHC6 1331 aa19.4■□□□□ 0.7
VPS51-213ENST00000533827 TSPAN1O60635 241 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 CLASP2O75122 1294 aaKnown RBP19.39■□□□□ 0.69
VPS51-213ENST00000533827 DDHD2O94830 711 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 ERLIN2O94905 339 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 CXCL14O95715 111 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 SPATA31C1P0DKV0 1188 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 HOXB8P17481 243 aaPredicted RBP19.39■□□□□ 0.69
VPS51-213ENST00000533827 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
VPS51-213ENST00000533827 AXLP30530 894 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 MCM7P33993 719 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 SLC11A1P49279 550 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 AFF1P51825 1210 aaKnown RBP19.39■□□□□ 0.69
VPS51-213ENST00000533827 CAPSQ13938 189 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 TFDP1Q14186 410 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 SMG8Q8ND04 991 aaKnown RBP19.39■□□□□ 0.69
VPS51-213ENST00000533827 CNNM3Q8NE01 707 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 URGCPQ8TCY9 931 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 ASAP3Q8TDY4 903 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 PIGOQ8TEQ8 1089 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 CASP10Q92851 521 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 C8orf76Q96K31 380 aa19.39■□□□□ 0.69
VPS51-213ENST00000533827 TRIOO75962 3097 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 A0A087WWV3 80 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 CTSAP10619 480 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 ATP2B1P20020 1258 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 GLRA2P23416 452 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 MBTD1Q05BQ5 628 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 BMS1Q14692 1282 aaKnown RBP19.38■□□□□ 0.69
VPS51-213ENST00000533827 AMHR2Q16671 573 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 FAM122AQ96E09 287 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 ZSCAN31Q96LW9 406 aaPredicted RBP19.38■□□□□ 0.69
VPS51-213ENST00000533827 NFKBIZQ9BYH8 718 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 FOXP1Q9H334 677 aaPredicted RBP19.38■□□□□ 0.69
VPS51-213ENST00000533827 TUFT1Q9NNX1 390 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 KANSL3Q9P2N6 904 aa19.38■□□□□ 0.69
VPS51-213ENST00000533827 INO80B-WBP1J3KQ70 363 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 ORC2Q13416 577 aaPredicted RBP19.37■□□□□ 0.69
VPS51-213ENST00000533827 GIT2Q14161 759 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 CATSPER3Q86XQ3 398 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 FBXO18Q8NFZ0 1043 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 AUTS2Q8WXX7 1259 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 EDAQ92838 391 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 CCDC51Q96ER9 411 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 CPB2Q96IY4 423 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 RPGRIP1Q96KN7 1286 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 CCDC43Q96MW1 224 aaKnown RBP19.37■□□□□ 0.69
VPS51-213ENST00000533827 TMEM175Q9BSA9 504 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 APOL5Q9BWW9 433 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 VN1R3Q9BXE9 311 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
VPS51-213ENST00000533827 UBN1Q9NPG3 1134 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 IPPQ9Y573 584 aa19.37■□□□□ 0.69
VPS51-213ENST00000533827 INPPL1O15357 1258 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 MED24O75448 989 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 ALDH2P05091 517 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 ITGA4P13612 1032 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 HMGN5P82970 282 aaKnown RBP19.36■□□□□ 0.69
VPS51-213ENST00000533827 C8orf34Q49A92 452 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 NOTUMQ6P988 496 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 POLR3CQ9BUI4 534 aaPredicted RBP19.36■□□□□ 0.69
VPS51-213ENST00000533827 CSRNP2Q9H175 543 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 POLR3FQ9H1D9 316 aaPredicted RBP19.36■□□□□ 0.69
VPS51-213ENST00000533827 RNF39Q9H2S5 420 aa19.36■□□□□ 0.69
VPS51-213ENST00000533827 DBR1Q9UK59 544 aaKnown RBP19.36■□□□□ 0.69
VPS51-213ENST00000533827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.35■□□□□ 0.69
VPS51-213ENST00000533827 USO1O60763 962 aaKnown RBP19.35■□□□□ 0.69
VPS51-213ENST00000533827 POMCP01189 267 aa19.35■□□□□ 0.69
VPS51-213ENST00000533827 ARF4P18085 180 aaPredicted RBP19.35■□□□□ 0.69
VPS51-213ENST00000533827 CA8P35219 290 aa19.35■□□□□ 0.69
VPS51-213ENST00000533827 NCBP1Q09161 790 aaKnown RBP19.35■□□□□ 0.69
VPS51-213ENST00000533827 ZNF174Q15697 407 aa19.35■□□□□ 0.69
VPS51-213ENST00000533827 TPRNQ4KMQ1 711 aa19.35■□□□□ 0.69
VPS51-213ENST00000533827 FAM193BQ96PV7 902 aaPredicted RBP19.35■□□□□ 0.69
VPS51-213ENST00000533827 SH2B1Q9NRF2 756 aaPredicted RBP19.35■□□□□ 0.69
VPS51-213ENST00000533827 STK39Q9UEW8 545 aa19.35■□□□□ 0.69
VPS51-213ENST00000533827 NRP1O14786 923 aa19.34■□□□□ 0.69
VPS51-213ENST00000533827 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
VPS51-213ENST00000533827 OR52Z1P0C646 297 aa19.34■□□□□ 0.69
VPS51-213ENST00000533827 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
VPS51-213ENST00000533827 ITIH3Q06033 890 aa19.34■□□□□ 0.69
VPS51-213ENST00000533827 PTPN14Q15678 1187 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms