RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 TGM5O43548 720 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
CSDE1-215ENST00000533818 ZMYND10O75800 440 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 SOD2P04179 222 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 ALDH2P05091 517 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 TAS1R1Q7RTX1 841 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 WDR5BQ86VZ2 330 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 ZNF280BQ86YH2 543 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 HOMER1Q86YM7 354 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 SIRT2Q8IXJ6 389 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 FAM3CQ92520 227 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 LPPQ93052 612 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 GPATCH3Q96I76 525 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 LRRCC1Q9C099 1032 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 RXFP1Q9HBX9 757 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 JPH1Q9HDC5 661 aaPredicted RBP12.06□□□□□ -0.48
CSDE1-215ENST00000533818 DACT1Q9NYF0 836 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
CSDE1-215ENST00000533818 HBP1O60381 514 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 B4GALT3O60512 393 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 PAPSS2O95340 614 aaPredicted RBP12.05□□□□□ -0.48
CSDE1-215ENST00000533818 C1RP00736 705 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 FGAP02671 866 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 ITGB5P18084 799 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
CSDE1-215ENST00000533818 GLUD2P49448 558 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 NLRP11P59045 1033 aaKnown RBP12.05□□□□□ -0.48
CSDE1-215ENST00000533818 HAND2P61296 217 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 MTMR1Q13613 665 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 CCDC178Q5BJE1 867 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 ZNF605Q86T29 641 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 ITFG1Q8TB96 612 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 ESR2Q92731 530 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 DNASE1L2Q92874 299 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 PLA2G2FQ9BZM2 168 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
CSDE1-215ENST00000533818 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
CSDE1-215ENST00000533818 ECI2O75521 394 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 OFD1O75665 1012 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 RPP40O75818 363 aaKnown RBP12.04□□□□□ -0.48
CSDE1-215ENST00000533818 CHRNB1P11230 501 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 HOXA6P31267 233 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 SLC26A2P50443 739 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 ACTR2P61160 394 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 FGD1P98174 961 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 ZNF484Q5JVG2 852 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 LILRA6Q6PI73 481 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 MIER1Q8N108 512 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 DEFB124Q8NES8 71 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 SMARCC2Q8TAQ2 1214 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 GAB3Q8WWW8 586 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 PIGSQ96S52 555 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 HERC2P3Q9BVR0 1158 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 RAI2Q9Y5P3 530 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 F5P12259 2224 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 ASXL3Q9C0F0 2248 aa12.04□□□□□ -0.48
CSDE1-215ENST00000533818 NRP1O14786 923 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 DDHD2O94830 711 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
CSDE1-215ENST00000533818 FGFR4P22455 802 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 PHKA2P46019 1235 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 SCAPQ12770 1279 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 BRD9Q9H8M2 597 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 POLIQ9UNA4 740 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 MYH6P13533 1939 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 COL1A2P08123 1366 aa12.03□□□□□ -0.48
CSDE1-215ENST00000533818 MAFGO15525 162 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 C1QL1O75973 258 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 C22orf31O95567 290 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 CCDC192P0DO97 292 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 HOXC13P31276 330 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 PTGDRQ13258 359 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 NPAS3Q8IXF0 933 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 URGCPQ8TCY9 931 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 CUL5Q93034 780 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 ZNF668Q96K58 619 aaPredicted RBP12.02□□□□□ -0.49
CSDE1-215ENST00000533818 FAM193BQ96PV7 902 aaPredicted RBP12.02□□□□□ -0.49
CSDE1-215ENST00000533818 TMEM175Q9BSA9 504 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 RNF41Q9H4P4 317 aaPredicted RBP12.02□□□□□ -0.49
CSDE1-215ENST00000533818 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 AKT3Q9Y243 479 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 PIAS3Q9Y6X2 628 aa12.02□□□□□ -0.49
CSDE1-215ENST00000533818 PNMA6FA0A0J9YX94 578 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 LNP1A1A4G5 178 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 FAM221BA6H8Z2 402 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 MEIS3P2A8K0S8 358 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 ZBTB42B2RXF5 422 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 BACH1O14867 736 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 ARHGAP6O43182 974 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 HNRNPA1P09651 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 SKIP12755 728 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms