RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 EPHX3Q9H6B9 360 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 RSAD1Q9HA92 442 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 TBC1D13Q9NVG8 400 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 LRWD1Q9UFC0 647 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 LZTS1Q9Y250 596 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 TRIP11Q15643 1979 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 HIDE1A8MVS5 230 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 FSCN2O14926 492 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 MBTPS2O43462 519 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 OFD1O75665 1012 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 GLP2RO95838 553 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 POMCP01189 267 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 ITGA4P13612 1032 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 U2AF2P26368 475 aaKnown RBP eCLIP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 RPA1P27694 616 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 HOXA11P31270 313 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 TOB1P50616 345 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 MBTD1Q05BQ5 628 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 PTGDRQ13258 359 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 SMAD4Q13485 552 aaKnown RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 DUSP6Q16828 381 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 UBXN11Q5T124 520 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 PDE12Q6L8Q7 609 aaKnown RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 CDR2LQ86X02 465 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 MCPH1Q8NEM0 835 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 SNX29Q8TEQ0 813 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 APOL5Q9BWW9 433 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 EIF2AQ9BY44 585 aaKnown RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 TRIM6Q9C030 488 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 POLD4Q9HCU8 107 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 DNAJB4Q9UDY4 337 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 DBR1Q9UK59 544 aaKnown RBP11.58□□□□□ -0.56
CAPN1-225ENST00000533704 SMC3Q9UQE7 1217 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 HES2Q9Y543 173 aa11.58□□□□□ -0.56
CAPN1-225ENST00000533704 PP2D1A8MPX8 630 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 B4GALT5O43286 388 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 NPTXRO95502 500 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 ARF4P18085 180 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 AXLP30530 894 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 SLC11A1P49279 550 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 AFF1P51825 1210 aaKnown RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 BMS1Q14692 1282 aaKnown RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 MRPL10Q7Z7H8 261 aaKnown RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 TMEM173Q86WV6 379 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 ZNF280BQ86YH2 543 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 ZBTB8OSQ8IWT0 167 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 TMEM87AQ8NBN3 555 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 AUTS2Q8WXX7 1259 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 RAB34Q9BZG1 259 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 BHMT2Q9H2M3 363 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 NGRNQ9NPE2 291 aaKnown RBP11.57□□□□□ -0.56
CAPN1-225ENST00000533704 CLEC1BQ9P126 229 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 IPPQ9Y573 584 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 CNTNAP2Q9UHC6 1331 aa11.57□□□□□ -0.56
CAPN1-225ENST00000533704 B4GALT3O60512 393 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 CXCL14O95715 111 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 SSBP05455 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 GALTP07902 379 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 SRGAP2BP0DMP2 458 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 CYP11B2P19099 503 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 NCLP19338 710 aaKnown RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 MLH1P40692 756 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 MCM2P49736 904 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 ZP2Q05996 745 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 PCBP1Q15365 356 aaKnown RBP eCLIP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 SMAD2Q15796 467 aaKnown RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 ECM1Q16610 540 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 KRT79Q5XKE5 535 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 ADHFE1Q8IWW8 467 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 VPS52Q8N1B4 723 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 CNNM3Q8NE01 707 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 BCL7CQ8WUZ0 217 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 RSPH1Q8WYR4 309 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 BSNDQ8WZ55 320 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 IGSF21Q96ID5 467 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 MSLNLQ96KJ4 702 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 GAD1Q99259 594 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 CDCA3Q99618 268 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 C1QTNF1Q9BXJ1 281 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
CAPN1-225ENST00000533704 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms