RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 AMHR2Q16671 573 aa18.87■□□□□ 0.61
FGFR1-239ENST00000533619 CMTR2Q8IYT2 770 aaKnown RBP18.87■□□□□ 0.61
FGFR1-239ENST00000533619 SAMD11Q96NU1 681 aa18.87■□□□□ 0.61
FGFR1-239ENST00000533619 REEP2Q9BRK0 252 aa18.87■□□□□ 0.61
FGFR1-239ENST00000533619 PARVGQ9HBI0 331 aa18.87■□□□□ 0.61
FGFR1-239ENST00000533619 MYO9BQ13459 2157 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 COL4A6Q14031 1691 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 ADGRA3Q8IWK6 1321 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 A0A087X0B3 334 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 NPHP3-ACAD11A0A0J9YXS1 232 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 A0A1B0GUA9 196 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 LINC01553A4QN01 128 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 TBCAO75347 108 aaKnown RBP18.86■□□□□ 0.61
FGFR1-239ENST00000533619 PRKCBP05771 671 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 ARF4P18085 180 aaPredicted RBP18.86■□□□□ 0.61
FGFR1-239ENST00000533619 ABCD1P33897 745 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 PRPF4BQ13523 1007 aaKnown RBP18.86■□□□□ 0.61
FGFR1-239ENST00000533619 TMEM132AQ24JP5 1023 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 Q7L0L9 218 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 ZNF598Q86UK7 904 aaKnown RBP18.86■□□□□ 0.61
FGFR1-239ENST00000533619 ABI1Q8IZP0 508 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 MYCT1Q8N699 235 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 TGS1Q96RS0 853 aaKnown RBP18.86■□□□□ 0.61
FGFR1-239ENST00000533619 CCDC113Q9H0I3 377 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 TNMDQ9H2S6 317 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
FGFR1-239ENST00000533619 MTMR10Q9NXD2 777 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 ARHGAP28Q9P2N2 729 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 RWDD3Q9Y3V2 267 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 PCDHB2Q9Y5E7 798 aa18.86■□□□□ 0.61
FGFR1-239ENST00000533619 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 POLR2DO15514 142 aaKnown RBP18.85■□□□□ 0.61
FGFR1-239ENST00000533619 ZNF131P52739 623 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 ERVK-21P61565 698 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 E2F4Q16254 413 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 SLC27A1Q6PCB7 646 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 MRPL10Q7Z7H8 261 aaKnown RBP18.85■□□□□ 0.61
FGFR1-239ENST00000533619 HACE1Q8IYU2 909 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 RNF169Q8NCN4 708 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 SLC17A8Q8NDX2 589 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 DDX12PQ92771 950 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 DHX58Q96C10 678 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 CPB2Q96IY4 423 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 FAM161BQ96MY7 647 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 KIFC3Q9BVG8 833 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 TRIM6Q9C030 488 aaPredicted RBP18.85■□□□□ 0.61
FGFR1-239ENST00000533619 TMEM117Q9H0C3 514 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 MAGEF1Q9HAY2 307 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 CHMP5Q9NZZ3 219 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 KCNH3Q9ULD8 1083 aa18.85■□□□□ 0.61
FGFR1-239ENST00000533619 FNDC1Q4ZHG4 1894 aaPredicted RBP18.84■□□□□ 0.61
FGFR1-239ENST00000533619 N4BP3O15049 544 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 SLC16A4O15374 487 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 TRAK2O60296 914 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 LIG1P18858 919 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 CACNB1Q02641 598 aaPredicted RBP18.84■□□□□ 0.61
FGFR1-239ENST00000533619 STRN3Q13033 797 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 GRIN2CQ14957 1233 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 UBXN11Q5T124 520 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 DYMQ7RTS9 669 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 APBB1IPQ7Z5R6 666 aaPredicted RBP18.84■□□□□ 0.61
FGFR1-239ENST00000533619 KCNN1Q92952 543 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 ADPGKQ9BRR6 497 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 ZHX3Q9H4I2 956 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 UBN1Q9NPG3 1134 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 KBTBD4Q9NVX7 518 aa18.84■□□□□ 0.61
FGFR1-239ENST00000533619 A0A1W2PQ27 194 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 A0A1W2PQ64 194 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 A0A1W2PQD8 194 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 MYMKA6NI61 221 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 TBKBP1A7MCY6 615 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 B4GALT5O43286 388 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 GAP43P17677 238 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 NCKAP1LP55160 1127 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 TMEM161BQ8NDZ6 487 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 MRPL4Q9BYD3 311 aaKnown RBP18.83■□□□□ 0.6
FGFR1-239ENST00000533619 SEL1LQ9UBV2 794 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 USP25Q9UHP3 1055 aa18.83■□□□□ 0.6
FGFR1-239ENST00000533619 GOLGA6L4A6NEF3 574 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 RB1P06400 928 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 MAPTP10636 758 aaKnown RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 FGFR1P11362 822 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 ITGA4P13612 1032 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 ATF7P17544 494 aaPredicted RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 CSPP1Q1MSJ5 1256 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 PAN2Q504Q3 1202 aaKnown RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 GLB1LQ6UWU2 654 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 HAUS6Q7Z4H7 955 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 TMEM192Q8IY95 271 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 CEP57L1Q8IYX8 460 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 ARNTL2Q8WYA1 636 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 CLP1Q92989 425 aaKnown RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 DNAJC19Q96DA6 116 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 GAS2L1Q99501 681 aaPredicted RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 CDX2Q99626 313 aaPredicted RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 MRPL9Q9BYD2 267 aaKnown RBP18.82■□□□□ 0.6
FGFR1-239ENST00000533619 AAASQ9NRG9 546 aa18.82■□□□□ 0.6
FGFR1-239ENST00000533619 IPPQ9Y573 584 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms