RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 COL4A6Q14031 1691 aa19.01■□□□□ 0.63
CTSB-229ENST00000533572 CHD7Q9P2D1 2997 aa19■□□□□ 0.63
CTSB-229ENST00000533572 DGKIO75912 1065 aa19■□□□□ 0.63
CTSB-229ENST00000533572 CTNNB1P35222 781 aa19■□□□□ 0.63
CTSB-229ENST00000533572 PPP2R5AQ15172 486 aa19■□□□□ 0.63
CTSB-229ENST00000533572 CCDC85BQ15834 202 aaPredicted RBP19■□□□□ 0.63
CTSB-229ENST00000533572 TMEM192Q8IY95 271 aa19■□□□□ 0.63
CTSB-229ENST00000533572 CMTR2Q8IYT2 770 aaKnown RBP19■□□□□ 0.63
CTSB-229ENST00000533572 LRRC15Q8TF66 581 aa19■□□□□ 0.63
CTSB-229ENST00000533572 PAGE5Q96GU1 130 aa19■□□□□ 0.63
CTSB-229ENST00000533572 C7orf25Q9BPX7 421 aa19■□□□□ 0.63
CTSB-229ENST00000533572 DACT1Q9NYF0 836 aa19■□□□□ 0.63
CTSB-229ENST00000533572 C9IYK1 514 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 TBCAO75347 108 aaKnown RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 SRGAP2CP0DJJ0 459 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 SCP2P22307 547 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 FGFR4P22455 802 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 SKOR2Q2VWA4 1001 aaPredicted RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 PAN2Q504Q3 1202 aaKnown RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 EPC2Q52LR7 807 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 KSR1Q8IVT5 923 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.99■□□□□ 0.63
CTSB-229ENST00000533572 PRPF31Q8WWY3 499 aaKnown RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 DDX12PQ92771 950 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 CCDC47Q96A33 483 aaKnown RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 ZNF689Q96CS4 500 aaPredicted RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 IFT74Q96LB3 600 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 RUSC1Q9BVN2 902 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 TRIM9Q9C026 710 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 XPNPEP1Q9NQW7 623 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 TMEM161AQ9NX61 479 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 LARSQ9P2J5 1176 aaKnown RBP18.99■□□□□ 0.63
CTSB-229ENST00000533572 MTCH2Q9Y6C9 303 aa18.99■□□□□ 0.63
CTSB-229ENST00000533572 ARID2Q68CP9 1835 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 PVALEFA0A1B0GWK0 134 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 MYMKA6NI61 221 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 HOXA2O43364 376 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 CSDE1O75534 798 aaKnown RBP18.98■□□□□ 0.63
CTSB-229ENST00000533572 GAP43P17677 238 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 ABCD1P33897 745 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 ARL2P36404 184 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 LAMTOR4Q0VGL1 99 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 GIT2Q14161 759 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 TFDP1Q14186 410 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 DSC3Q14574 896 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 SKIV2LQ15477 1246 aaKnown RBP18.98■□□□□ 0.63
CTSB-229ENST00000533572 PTPROQ16827 1216 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 ARSHQ5FYA8 562 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 FAM102BQ5T8I3 360 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 CCDC65Q8IXS2 484 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 RC3H2Q9HBD1 1191 aaKnown RBP18.98■□□□□ 0.63
CTSB-229ENST00000533572 LMCD1Q9NZU5 365 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 SEL1LQ9UBV2 794 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 PIN4Q9Y237 131 aaKnown RBP18.98■□□□□ 0.63
CTSB-229ENST00000533572 PRRC2BQ5JSZ5 2229 aaKnown RBP18.98■□□□□ 0.63
CTSB-229ENST00000533572 PHLPP2Q6ZVD8 1323 aa18.98■□□□□ 0.63
CTSB-229ENST00000533572 H0YCG3 227 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 HIP1RO75146 1068 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 FAM13AO94988 1023 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 POU3F3P20264 500 aaPredicted RBP18.97■□□□□ 0.63
CTSB-229ENST00000533572 AFMP43652 599 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 PHKA2P46019 1235 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 GPM6BQ13491 265 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 POSTNQ15063 836 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
CTSB-229ENST00000533572 TWF2Q6IBS0 349 aaKnown RBP18.97■□□□□ 0.63
CTSB-229ENST00000533572 SRGAP1Q7Z6B7 1085 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 ABI1Q8IZP0 508 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 RNF149Q8NC42 400 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 GTPBP4Q9BZE4 634 aaKnown RBP18.97■□□□□ 0.63
CTSB-229ENST00000533572 ELAC1Q9H777 363 aaKnown RBP18.97■□□□□ 0.63
CTSB-229ENST00000533572 PARVGQ9HBI0 331 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 CHST12Q9NRB3 414 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 COL4A4P53420 1690 aaPredicted RBP18.97■□□□□ 0.63
CTSB-229ENST00000533572 VCANP13611 3396 aa18.97■□□□□ 0.63
CTSB-229ENST00000533572 TBKBP1A7MCY6 615 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 SMC2O95347 1197 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 RB1P06400 928 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 ZNF131P52739 623 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 SMTNP53814 917 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 ASIC1P78348 528 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 DYMQ7RTS9 669 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 SYAP1Q96A49 352 aaPredicted RBP18.96■□□□□ 0.63
CTSB-229ENST00000533572 REEP2Q9BRK0 252 aa18.96■□□□□ 0.63
CTSB-229ENST00000533572 C11orf84Q9BUA3 381 aaPredicted RBP18.96■□□□□ 0.63
CTSB-229ENST00000533572 POLR3FQ9H1D9 316 aaPredicted RBP18.96■□□□□ 0.63
CTSB-229ENST00000533572 RALGAPA2Q2PPJ7 1873 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 FRMD3A2A2Y4 597 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 H3BNC9 293 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 LPXNO60711 386 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 ERLIN2O94905 339 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 MAPTP10636 758 aaKnown RBP18.95■□□□□ 0.62
CTSB-229ENST00000533572 SKIP12755 728 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 PLS3P13797 630 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 BMPR1AP36894 532 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 NAMPTP43490 491 aa18.95■□□□□ 0.62
CTSB-229ENST00000533572 GATMP50440 423 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms