RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 STRA6Q9BX79 667 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 EIF2AQ9BY44 585 aaKnown RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 NFKBIZQ9BYH8 718 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 HAPLN2Q9GZV7 340 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 NUP62CLQ9H1M0 184 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 FZD8Q9H461 694 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 MRPL44Q9H9J2 332 aaKnown RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 OLFML3Q9NRN5 406 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 EXOC1Q9NV70 894 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 TMEM63CQ9P1W3 806 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 LARSQ9P2J5 1176 aaKnown RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 MAN1B1Q9UKM7 699 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 PDCD11Q14690 1871 aaKnown RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 PVALEFA0A1B0GWK0 134 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 MEIS3P2A8K0S8 358 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 ERLIN2O94905 339 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 HARSP12081 509 aaKnown RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 BMP6P22004 513 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 GATMP50440 423 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 MAPK6Q16659 721 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 UBXN11Q5T124 520 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 FAM109BQ6ICB4 259 aaPredicted RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 CAVIN1Q6NZI2 390 aaKnown RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 CNKSR3Q6P9H4 555 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 PPP4R3CPQ6ZMV5 832 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 EPM2AIP1Q7L775 607 aaPredicted RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 ZNF720Q7Z2F6 126 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 NELFCDQ8IXH7 590 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 SPATA20Q8TB22 786 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 SCFD1Q8WVM8 642 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 SEPT8Q92599 483 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 SMARCE1Q969G3 411 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 ZBTB45Q96K62 511 aaPredicted RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 NTPCRQ9BSD7 190 aaKnown RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 LRRC27Q9C0I9 530 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 C2orf40Q9H1Z8 148 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 PDZD7Q9H5P4 517 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 C17orf75Q9HAS0 396 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 PRMT7Q9NVM4 692 aaPredicted RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 TBX20Q9UMR3 447 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 MAPK8IP1Q9UQF2 711 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 SQORQ9Y6N5 450 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 FNDC1Q4ZHG4 1894 aaPredicted RBP8.68□□□□□ -1.02
COMMD9-207ENST00000533308 TRIP11Q15643 1979 aa8.68□□□□□ -1.02
COMMD9-207ENST00000533308 ANKRD63C9JTQ0 380 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 K7ERI5 159 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ACKR2O00590 384 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ABLIM1O14639 778 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 GPR182O15218 404 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 RHOBTB3O94955 611 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 NPTXRO95502 500 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 MBD3O95983 291 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 MYL1P05976 194 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ATF7P17544 494 aaPredicted RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 SARSP49591 514 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 TTC3P53804 2025 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 SMTNP53814 917 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 WDR5P61964 334 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 GTF2BQ00403 316 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 POU5F1BQ06416 359 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 PRPF4BQ13523 1007 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 SHHQ15465 462 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 FAM187BQ17R55 369 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 SEZ6Q53EL9 994 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ZBTB41Q5SVQ8 909 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 L1TD1Q5T7N2 865 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 TWF2Q6IBS0 349 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 KANK3Q6NY19 840 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 PSRC1Q6PGN9 363 aaPredicted RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 CEP120Q8N960 986 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 USP38Q8NB14 1042 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ZSWIM2Q8NEG5 633 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 LPPQ93052 612 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ACO2Q99798 780 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ADAM2Q99965 735 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 UBE2OQ9C0C9 1292 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 CXCL16Q9H2A7 254 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 NXF3Q9H4D5 531 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ST6GALNAC4Q9H4F1 302 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 TMEM134Q9H6X4 195 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 ANKFY1Q9P2R3 1169 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 SEL1LQ9UBV2 794 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 HES2Q9Y543 173 aa8.67□□□□□ -1.02
COMMD9-207ENST00000533308 RANBP2P49792 3224 aaKnown RBP8.67□□□□□ -1.02
COMMD9-207ENST00000533308 CITO14578 2027 aa8.66□□□□□ -1.02
COMMD9-207ENST00000533308 ZBBXA8MT70 800 aa8.66□□□□□ -1.02
COMMD9-207ENST00000533308 GRXCR1A8MXD5 290 aa8.66□□□□□ -1.02
COMMD9-207ENST00000533308 HNRNPDLO14979 420 aaKnown RBP8.66□□□□□ -1.02
COMMD9-207ENST00000533308 MEFVO15553 781 aaPredicted RBP8.66□□□□□ -1.02
COMMD9-207ENST00000533308 PARNO95453 639 aaKnown RBP8.66□□□□□ -1.02
COMMD9-207ENST00000533308 FGBP02675 491 aa8.66□□□□□ -1.02
COMMD9-207ENST00000533308 PFKMP08237 780 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms