RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 NMT1P30419 496 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 HOXA11P31270 313 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 MCM4P33991 863 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 KCNJ6P48051 423 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 GTF2BQ00403 316 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 DPYDQ12882 1025 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 PSMD2Q13200 908 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 ALCAMQ13740 583 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 TCTN1Q2MV58 587 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 STXBP4Q6ZWJ1 553 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 SLC24A5Q71RS6 500 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 RTN4RL1Q86UN2 441 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 KCNN1Q92952 543 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 RNPC3Q96LT9 517 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 MRPL4Q9BYD3 311 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 CCDC113Q9H0I3 377 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 C1orf112Q9NSG2 853 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 EXOC1Q9NV70 894 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 TBX20Q9UMR3 447 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 EVPLQ92817 2033 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 B4GALT5O43286 388 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 KLRC4O43908 158 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 SKIP12755 728 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 PNOCQ13519 176 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 DSC3Q14574 896 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 AMHR2Q16671 573 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 ZC2HC1CQ53FD0 456 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 FAM26FQ5R3K3 315 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 NT5DC1Q5TFE4 455 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 NOTUMQ6P988 496 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 PHOSPHO2Q8TCD6 241 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 CCDC51Q96ER9 411 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 CPB2Q96IY4 423 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 RMND1Q9NWS8 449 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
TRAPPC4-211ENST00000533012 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 A0A0U1RQF3 1178 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 RBAK-RBAKDNI3L0D1 243 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 N4BP3O15049 544 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 MGEA5O60502 916 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 MBD3O95983 291 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 WDR5P61964 334 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 FAM189BP81408 668 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 EHHADHQ08426 723 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 KCNB1Q14721 858 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 CAMK4Q16566 473 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 RASIP1Q5U651 963 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 ZPBP2Q6X784 338 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 APBB1IPQ7Z5R6 666 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 MYOCDQ8IZQ8 938 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 BICD1Q96G01 975 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 ACCSQ96QU6 501 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 TCHPQ9BT92 498 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 TRAIPQ9BWF2 469 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 STRA6Q9BX79 667 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 TRIM6Q9C030 488 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRO3102Q9H379 93 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 SLC39A2Q9NP94 309 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 CXXC1Q9P0U4 656 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 EXOC7Q9UPT5 735 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 USP20Q9Y2K6 914 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 PCDHB7Q9Y5E2 793 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 CNTNAP2Q9UHC6 1331 aa12.34□□□□□ -0.43
TRAPPC4-211ENST00000533012 C9IYK1 514 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZNF623O75123 536 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 PPP1R37O75864 691 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 RHOBTB3O94955 611 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 UPP2O95045 317 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 EOMESO95936 686 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 STAG3L1P0CL83 205 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 MYBP10242 640 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 SARSP49591 514 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 LIG4P49917 911 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 RAB27AP51159 221 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms