RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 PDXDC1Q6P996 788 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 SCN4BQ8IWT1 228 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 RNF149Q8NC42 400 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 FIS1Q9Y3D6 152 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 CPP00450 1065 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 NR3C2P08235 984 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 TSPY1Q01534 308 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 CYP27A1Q02318 531 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 SCYL3Q8IZE3 742 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 GPRC5AQ8NFJ5 357 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ADAMTS1Q9UHI8 967 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 GTPBP10A4D1E9 387 aaKnown RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 NDUFA10O95299 355 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 EYA4O95677 639 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ANTXR2P58335 489 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 KCNH2Q12809 1159 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■■■□□ 14.9
CTNND1-232ENST00000532649 FOXD4Q12950 439 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 TMEM270Q6UE05 265 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM42Q8IWZ5 723 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 LRRC8CQ8TDW0 803 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 PIDD1Q9HB75 910 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 SLC25A27O95847 323 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 CXCR5P32302 372 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 PPP4CP60510 307 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ARL13BQ3SXY8 428 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ALKBH5Q6P6C2 394 aaKnown RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 PPWD1Q96BP3 646 aaKnown RBP9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ATG4CQ96DT6 458 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 ZBTB18Q99592 522 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 HOMER3Q9NSC5 361 aa9.32□□□□□ -0.92
CTNND1-232ENST00000532649 PFASO15067 1338 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 UBE2Q2LH0YL09 131 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PMLP29590 882 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 GCKP35557 465 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 AP1ARQ63HQ0 302 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM68Q6AZZ1 485 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 DARS2Q6PI48 645 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PASD1Q8IV76 773 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 SH2D3AQ9BRG2 576 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 EFHD1Q9BUP0 239 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 NGRNQ9NPE2 291 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 ADARB2Q9NS39 739 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 STX18Q9P2W9 335 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 MAGED2Q9UNF1 606 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 STXBP3O00186 592 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 NEMP1O14524 444 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 MAFGO15525 162 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 GH1P01241 217 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PSMA2P25787 234 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 ARHGEF18Q6ZSZ5 1173 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 HAUS6Q7Z4H7 955 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 DNAAF3Q8N9W5 541 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 EXOC4Q96A65 974 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 OPTNQ96CV9 577 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 ZWILCHQ9H900 591 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 JMJD4Q9H9V9 463 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 TLK1Q9UKI8 766 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 EFCAB8A8MWE9 144 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 KBTBD13C9JR72 458 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 H3BRJ5 948 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PGRMC1O00264 195 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 SREBF2Q12772 1141 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 HSP90AA5PQ58FG0 334 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PATL1Q86TB9 770 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PANX2Q96RD6 677 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 RBAKQ9NYW8 714 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 SCINQ9Y6U3 715 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 BCL9O00512 1426 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 NPHP3-ACAD11A0A0J9YXS1 232 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 LGALS16A8MUM7 142 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 PDIA5Q14554 519 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 NAALADL2Q58DX5 795 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 ATG16L1Q676U5 607 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 KLC3Q6P597 504 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 HSPH1Q92598 858 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 ABHD8Q96I13 439 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 COG4Q9H9E3 785 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 CEP72Q9P209 647 aa9.31□□□□□ -0.92
CTNND1-232ENST00000532649 AGO2Q9UKV8 859 aaKnown RBP9.31□□□□□ -0.92
CTNND1-232ENST00000532649 MFAP3LO75121 409 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 EPHX2P34913 555 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TTC19Q6DKK2 380 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 GPD1LQ8N335 351 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 WDR48Q8TAF3 677 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 ADAM22Q9P0K1 906 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 PIN4Q9Y237 131 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 NNMTP40261 264 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 SESN3P58005 492 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms