RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 ARL6IP4Q66PJ3 421 aaKnown RBP17.17■□□□□ 0.34
CTSB-225ENST00000532409 CDCA2Q69YH5 1023 aaPredicted RBP17.17■□□□□ 0.34
CTSB-225ENST00000532409 KCNT2Q6UVM3 1135 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 GLB1LQ6UWU2 654 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
CTSB-225ENST00000532409 TMEM173Q86WV6 379 aaPredicted RBP17.17■□□□□ 0.34
CTSB-225ENST00000532409 DAW1Q8N136 415 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 NECAB3Q96P71 396 aaPredicted RBP17.17■□□□□ 0.34
CTSB-225ENST00000532409 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
CTSB-225ENST00000532409 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 TBC1D13Q9NVG8 400 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 IPPQ9Y573 584 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 MUC3AQ02505 3323 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 NT5C1B-RDH14C9J2C7 533 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 HIP1RO75146 1068 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 SSBP05455 408 aaKnown RBP eCLIP17.16■□□□□ 0.34
CTSB-225ENST00000532409 SKIP12755 728 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 ERVFC1P60507 584 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
CTSB-225ENST00000532409 RAD51AP2Q09MP3 1159 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 HYAL1Q12794 435 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 PTPAQ15257 358 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 TMEM119Q4V9L6 283 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 NOMO2Q5JPE7 1267 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 HYIQ5T013 277 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 RINT1Q6NUQ1 792 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 EP400NLQ6ZTU2 488 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 CABP7Q86V35 215 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 ZNF558Q96NG5 402 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
CTSB-225ENST00000532409 COG5Q9UP83 839 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 STK24Q9Y6E0 443 aa17.16■□□□□ 0.34
CTSB-225ENST00000532409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.15■□□□□ 0.34
CTSB-225ENST00000532409 H3BQ06 376 aaPredicted RBP17.15■□□□□ 0.34
CTSB-225ENST00000532409 LINC01565O15544 149 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 STX6O43752 255 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 ZC3H11AO75152 810 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTSB-225ENST00000532409 NPTXRO95502 500 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 POMCP01189 267 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 BMP1P13497 986 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 NCLP19338 710 aaKnown RBP17.15■□□□□ 0.34
CTSB-225ENST00000532409 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
CTSB-225ENST00000532409 BCAR1P56945 870 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 MAPK7Q13164 816 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 C1orf186Q6ZWK4 172 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 HSCBQ8IWL3 235 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 SLC39A11Q8N1S5 342 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 DEPTORQ8TB45 409 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 PGBD4Q96DM1 585 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 MRPL9Q9BYD2 267 aaKnown RBP17.15■□□□□ 0.34
CTSB-225ENST00000532409 CCDC113Q9H0I3 377 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 FZD8Q9H461 694 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 IGFLR1Q9H665 355 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 NRDE2Q9H7Z3 1164 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 RSAD1Q9HA92 442 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
CTSB-225ENST00000532409 NPHP3-ACAD11A0A0J9YXS1 232 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 A0A1B0GUA9 196 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 DDHD2O94830 711 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 ITGA4P13612 1032 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 AXLP30530 894 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 NAMPTP43490 491 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 DLX2Q07687 328 aaPredicted RBP17.14■□□□□ 0.33
CTSB-225ENST00000532409 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.338e-8■■■□□ 17.8
CTSB-225ENST00000532409 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
CTSB-225ENST00000532409 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 USP49Q70CQ1 688 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 RBM23Q86U06 439 aaKnown RBP17.14■□□□□ 0.33
CTSB-225ENST00000532409 ADAMTS19Q8TE59 1207 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
CTSB-225ENST00000532409 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
CTSB-225ENST00000532409 ZFP42Q96MM3 310 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 GAD1Q99259 594 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 CLDND1Q9NY35 253 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 CNTNAP2Q9UHC6 1331 aa17.14■□□□□ 0.33
CTSB-225ENST00000532409 NCOR1O75376 2440 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 CCDC169A6NNP5 214 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 PER2O15055 1255 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 PRKCBP05771 671 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 AKAP5P24588 427 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 LTBRP36941 435 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 MLH1P40692 756 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 SLC12A3P55017 1021 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 PEX3P56589 373 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
CTSB-225ENST00000532409 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
CTSB-225ENST00000532409 RNASELQ05823 741 aaKnown RBP17.13■□□□□ 0.33
CTSB-225ENST00000532409 COL19A1Q14993 1142 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 KARSQ15046 597 aaKnown RBP17.13■□□□□ 0.33
CTSB-225ENST00000532409 PLPP4Q5VZY2 271 aa17.13■□□□□ 0.33
CTSB-225ENST00000532409 EEF1DP3Q658K8 133 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms