RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 CNTNAP2Q9UHC6 1331 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 MEIS3P2A8K0S8 358 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 STX6O43752 255 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 OFD1O75665 1012 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 NCLP19338 710 aaKnown RBP25.41■■□□□ 1.66
CAPN1-222ENST00000532285 DNAJB1P25685 340 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 FAM187BQ17R55 369 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 NOMO2Q5JPE7 1267 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 PPP4R3CPQ6ZMV5 832 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 AGMOQ6ZNB7 445 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 KCNK18Q7Z418 384 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 PNMA5Q96PV4 448 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 FZD8Q9H461 694 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 MTMR6Q9Y217 621 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 MYH15Q9Y2K3 1946 aa25.41■■□□□ 1.66
CAPN1-222ENST00000532285 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.4■■□□□ 1.66
CAPN1-222ENST00000532285 PPM1AP35813 382 aa25.4■■□□□ 1.66
CAPN1-222ENST00000532285 LONP1P36776 959 aaKnown RBP25.4■■□□□ 1.66
CAPN1-222ENST00000532285 CABP7Q86V35 215 aa25.4■■□□□ 1.66
CAPN1-222ENST00000532285 DEPTORQ8TB45 409 aa25.4■■□□□ 1.66
CAPN1-222ENST00000532285 COL25A1Q9BXS0 654 aaPredicted RBP25.4■■□□□ 1.66
CAPN1-222ENST00000532285 ZSCAN16Q9H4T2 348 aaPredicted RBP25.4■■□□□ 1.66
CAPN1-222ENST00000532285 RSAD1Q9HA92 442 aa25.4■■□□□ 1.66
CAPN1-222ENST00000532285 UBN1Q9NPG3 1134 aa25.4■■□□□ 1.66
CAPN1-222ENST00000532285 SPTBN5Q9NRC6 3674 aaKnown RBP25.4■■□□□ 1.66
CAPN1-222ENST00000532285 TDRD15B5MCY1 1934 aaKnown RBP25.39■■□□□ 1.66
CAPN1-222ENST00000532285 TCF20Q9UGU0 1960 aaKnown RBP25.39■■□□□ 1.66
CAPN1-222ENST00000532285 A0A1B0GUA9 196 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 CARNS1A5YM72 827 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 B4GALT5O43286 388 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 NCK2O43639 380 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 UBA7P41226 1012 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 PLCB3Q01970 1234 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 MAPK6Q16659 721 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 RINT1Q6NUQ1 792 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 SLC27A1Q6PCB7 646 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 C1orf186Q6ZWK4 172 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 SMG8Q8ND04 991 aaKnown RBP25.39■■□□□ 1.66
CAPN1-222ENST00000532285 URGCPQ8TCY9 931 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 TIPINQ9BVW5 301 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 EIF2AQ9BY44 585 aaKnown RBP25.39■■□□□ 1.66
CAPN1-222ENST00000532285 UBE2ZQ9H832 354 aaPredicted RBP25.39■■□□□ 1.66
CAPN1-222ENST00000532285 POLD4Q9HCU8 107 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 SPG21Q9NZD8 308 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 LZTS1Q9Y250 596 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 INPP5FQ9Y2H2 1132 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 IPPQ9Y573 584 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 CLIC4Q9Y696 253 aa25.39■■□□□ 1.66
CAPN1-222ENST00000532285 ITGA4P13612 1032 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 ALDH7A1P49419 539 aaKnown RBP25.38■■□□□ 1.65
CAPN1-222ENST00000532285 EFNA5P52803 228 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 TMEM119Q4V9L6 283 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 PPP2R3CQ969Q6 453 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 CALML4Q96GE6 196 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 DRC1Q96MC2 740 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 PLIN2Q99541 437 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 RUSC1Q9BVN2 902 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 TRIM6Q9C030 488 aaPredicted RBP25.38■■□□□ 1.65
CAPN1-222ENST00000532285 TLR9Q9NR96 1032 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 TBC1D13Q9NVG8 400 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 KANSL3Q9P2N6 904 aa25.38■■□□□ 1.65
CAPN1-222ENST00000532285 PUF60Q9UHX1 559 aaKnown RBP25.38■■□□□ 1.65
CAPN1-222ENST00000532285 HIP1RO75146 1068 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 CSPG5O95196 566 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 HSP90AA1P07900 732 aaKnown RBP25.37■■□□□ 1.65
CAPN1-222ENST00000532285 BCAR1P56945 870 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 KRT17Q04695 432 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 RNASELQ05823 741 aaKnown RBP25.37■■□□□ 1.65
CAPN1-222ENST00000532285 COL19A1Q14993 1142 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 PTPAQ15257 358 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 PDE12Q6L8Q7 609 aaKnown RBP25.37■■□□□ 1.65
CAPN1-222ENST00000532285 HACE1Q8IYU2 909 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 SYT2Q8N9I0 419 aaPredicted RBP25.37■■□□□ 1.65
CAPN1-222ENST00000532285 MRPS27Q92552 414 aaKnown RBP25.37■■□□□ 1.65
CAPN1-222ENST00000532285 PABPC5Q96DU9 382 aaKnown RBP25.37■■□□□ 1.65
CAPN1-222ENST00000532285 CCDC113Q9H0I3 377 aa25.37■■□□□ 1.65
CAPN1-222ENST00000532285 SSBP05455 408 aaKnown RBP eCLIP25.36■■□□□ 1.65
CAPN1-222ENST00000532285 PRKCBP05771 671 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 PDIA4P13667 645 aaKnown RBP25.36■■□□□ 1.65
CAPN1-222ENST00000532285 GUCY2CP25092 1073 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 IRS1P35568 1242 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 PBX3P40426 434 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 HYAL1Q12794 435 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 PRPF4BQ13523 1007 aaKnown RBP25.36■■□□□ 1.65
CAPN1-222ENST00000532285 FAM173BQ6P4H8 233 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 MICAL1Q8TDZ2 1067 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 C17orf75Q9HAS0 396 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 KCND2Q9NZV8 630 aa25.36■■□□□ 1.65
CAPN1-222ENST00000532285 ACKR2O00590 384 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 N4BP3O15049 544 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 ZC3H11AO75152 810 aaKnown RBP eCLIP25.35■■□□□ 1.65
CAPN1-222ENST00000532285 PLA2G4BP0C869 781 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 BMP1P13497 986 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 KCNQ1P51787 676 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 SLC12A3P55017 1021 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 GRIN1Q05586 938 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 DAW1Q8N136 415 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 SLC39A11Q8N1S5 342 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 NRDE2Q9H7Z3 1164 aa25.35■■□□□ 1.65
CAPN1-222ENST00000532285 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms