RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SMYD2Q9NRG4 433 aa5.04□□□□□ -1.6
AC055878.1-201ENST00000531858 DPP7Q9UHL4 492 aa5.04□□□□□ -1.6
AC055878.1-201ENST00000531858 SIK3Q9Y2K2 1263 aa5.04□□□□□ -1.6
AC055878.1-201ENST00000531858 DAGLAQ9Y4D2 1042 aa5.04□□□□□ -1.6
AC055878.1-201ENST00000531858 ASB1Q9Y576 335 aa5.04□□□□□ -1.6
AC055878.1-201ENST00000531858 PAXBP1Q9Y5B6 917 aa5.04□□□□□ -1.6
AC055878.1-201ENST00000531858 A0A087X0M5 115 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 A0A1B0GX30 115 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 A0A1W2PPL8 197 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 UBA6A0AVT1 1052 aaPredicted RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 SHISA3A0PJX4 238 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 LCHNA4D1U4 455 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 FAM171A2A8MVW0 826 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 FOXP2O15409 715 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 HYAL3O43820 417 aaPredicted RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 WISP1O95388 367 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 PAPLNO95428 1278 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 CLEC2LP0C7M8 214 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 EEF1GP26641 437 aaKnown RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 SERPINF1P36955 418 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 ATXN1P54253 815 aaKnown RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 TERF1P54274 439 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 POLE2P56282 527 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 FMO1Q01740 532 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 PMS2P11Q13670 270 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 COL9A3Q14050 684 aaPredicted RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 POSTNQ15063 836 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 ADRM1Q16186 407 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 TTC38Q5R3I4 469 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 CATSPEREQ5SY80 951 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 C1QTNF12Q5T7M4 302 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 HLA-DQA1Q5Y7H0 255 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 TANGO2Q6ICL3 276 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 KIAA1841Q6NSI8 718 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 FAM180AQ6UWF9 173 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 SEZ6L2Q6UXD5 910 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 FAM43BQ6ZT52 329 aaPredicted RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 LRRTM4Q86VH4 590 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 TMTC1Q8IUR5 882 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 OXR1Q8N573 874 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 CCDC33Q8N5R6 958 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 ESX1Q8N693 406 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 ATP11CQ8NB49 1132 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 SPPL3Q8TCT6 385 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 ZNF566Q969W8 418 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 BRIP1Q9BX63 1249 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 STK31Q9BXU1 1019 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 CEP41Q9BYV8 373 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 CNTD2Q9H8S5 307 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 TMEM8AQ9HCN3 771 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 MYO1AQ9UBC5 1043 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 RGS17Q9UGC6 210 aaPredicted RBP5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 FBXL7Q9UJT9 491 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 TMPRSS11EQ9UL52 423 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 WASF3Q9UPY6 502 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 ZNF281Q9Y2X9 895 aa5.03□□□□□ -1.6
AC055878.1-201ENST00000531858 NKRFO15226 690 aaKnown RBP eCLIP5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 BUB1BO60566 1050 aaPredicted RBP5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 PRPF6O94906 941 aaKnown RBP5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 PFKMP08237 780 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 SYPP08247 313 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 HOXD12P35452 270 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 ADD2P35612 726 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 LGALS4P56470 323 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 CORO7P57737 925 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 DSC2Q02487 901 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 GALNT1Q10472 559 aaPredicted RBP5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 GRM1Q13255 1194 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 PTK2BQ14289 1009 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 TAF11Q15544 211 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 SLC35G1Q2M3R5 365 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 ADCK5Q3MIX3 580 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 EMC4Q5J8M3 183 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 ZBTB41Q5SVQ8 909 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 CPZQ66K79 652 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 ITPRIPL1Q6GPH6 555 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 FSTL4Q6MZW2 842 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 SPOCD1Q6ZMY3 1216 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 KCTD1Q719H9 257 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 KANSL1Q7Z3B3 1105 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 GALNT5Q7Z7M9 940 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 TSPYL5Q86VY4 417 aaPredicted RBP5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 CPNE8Q86YQ8 564 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 TRIM48Q8IWZ4 208 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 CNPY4Q8N129 248 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 TOP6BLQ8N6T0 577 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 USHBP1Q8N6Y0 703 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 LSMEM1Q8N8F7 131 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 NAT16Q8N8M0 369 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 C3orf20Q8ND61 904 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 NLGN2Q8NFZ4 835 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 CYP2W1Q8TAV3 490 aa5.02□□□□□ -1.61
AC055878.1-201ENST00000531858 PHOSPHO1Q8TCT1 267 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms