RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 IGSF22Q8N9C0 903 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 URGCPQ8TCY9 931 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 FOXD4L4Q8WXT5 416 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 CDCA3Q99618 268 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 POLR3FQ9H1D9 316 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 TLE6Q9H808 572 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 STK39Q9UEW8 545 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 KIAA1024Q9UPX6 916 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 DNM3Q9UQ16 869 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 EYSQ5T1H1 3165 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 UNC80Q8N2C7 3258 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 TTC3P53804 2025 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-221ENST00000531068 TSPAN1O60635 241 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 CSPG5O95196 566 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 ITGA4P13612 1032 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
CAPN1-221ENST00000531068 IRS1P35568 1242 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 BCAR1P56945 870 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 CAPSQ13938 189 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 PPP2R5AQ15172 486 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 FAM173BQ6P4H8 233 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 MAEAQ7L5Y9 396 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 SNX29Q8TEQ0 813 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 LPPQ93052 612 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 CSRNP2Q9H175 543 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 RSAD1Q9HA92 442 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 PRMT7Q9NVM4 692 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-221ENST00000531068 INPP5FQ9Y2H2 1132 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
CAPN1-221ENST00000531068 MYO9BQ13459 2157 aa12.16□□□□□ -0.46
CAPN1-221ENST00000531068 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 ALDH2P05091 517 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 NRIP1P48552 1158 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 ERVFC1P60507 584 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 MBTD1Q05BQ5 628 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 KLHL40Q2TBA0 621 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 LONRF3Q496Y0 759 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 UBXN11Q5T124 520 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
CAPN1-221ENST00000531068 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
CAPN1-221ENST00000531068 SLC39A11Q8N1S5 342 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 DEPTORQ8TB45 409 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 KIFAP3Q92845 792 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 TMEM169Q96HH4 297 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 IFT74Q96LB3 600 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 PRIMPOLQ96LW4 560 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-221ENST00000531068 TRIM6Q9C030 488 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-221ENST00000531068 BHMT2Q9H2M3 363 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 GPRC5CQ9NQ84 441 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
CAPN1-221ENST00000531068 TBC1D13Q9NVG8 400 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 KCNG1Q9UIX4 513 aa12.15□□□□□ -0.46
CAPN1-221ENST00000531068 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.47
CAPN1-221ENST00000531068 TCHHQ07283 1943 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 A0A1B0GUA9 196 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 FSCN2O14926 492 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 ZC3H11AO75152 810 aaKnown RBP eCLIP12.14□□□□□ -0.47
CAPN1-221ENST00000531068 NR1I2O75469 434 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 EYA4O95677 639 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 BMP15O95972 392 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 ARF4P18085 180 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-221ENST00000531068 LTBRP36941 435 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 NAMPTP43490 491 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 NDUFV1P49821 464 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 MRE11P49959 708 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 EFNA5P52803 228 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-221ENST00000531068 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
CAPN1-221ENST00000531068 MAPK6Q16659 721 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 AMHR2Q16671 573 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 FAM187BQ17R55 369 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 SLC27A1Q6PCB7 646 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 AGMOQ6ZNB7 445 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 ADGRD2Q7Z7M1 963 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 TCF25Q9BQ70 676 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 FZD8Q9H461 694 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 NRDE2Q9H7Z3 1164 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 ENTPD7Q9NQZ7 604 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 CD207Q9UJ71 328 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 GIT1Q9Y2X7 761 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 TRANK1O15050 2925 aa12.14□□□□□ -0.47
CAPN1-221ENST00000531068 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms