RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 CNOT7Q9UIV1 285 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 SH3PXD2BA1X283 911 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 LRRC53A6NM62 1247 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC188H7C350 402 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 KRIT1O00522 736 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 CBFA2T3O75081 653 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TPPPO94811 219 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 RPN1P04843 607 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ZFYP08048 801 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 POTEIP0CG38 1075 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TAC1P20366 129 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ENDOUP21128 410 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 S100A1P23297 94 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 PCSK6P29122 969 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 GUCY1A2P33402 732 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 NAA20P61599 178 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 RPS6KA1Q15418 735 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TTI2Q6NXR4 508 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ZSCAN29Q8IWY8 852 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 UHMK1Q8TAS1 419 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ESR2Q92731 530 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 GFM2Q969S9 779 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 GRAMD1AQ96CP6 724 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TRIM47Q96LD4 638 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 DBNDD2Q9BQY9 259 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 NACAP1Q9BZK3 213 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TRIM31Q9BZY9 425 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 RBM38Q9H0Z9 239 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 EBF3Q9H4W6 596 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 RETREG1Q9H6L5 497 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 PSTPIP2Q9H939 334 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TRPC7Q9HCX4 862 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 STX8Q9UNK0 236 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 HBS1LQ9Y450 684 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 NOX1Q9Y5S8 564 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 FPGT-TNNI3KV9GXZ4 949 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 SIPA1L3O60292 1781 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TRPM3Q9HCF6 1732 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 WDR19Q8NEZ3 1342 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC162PA2VCL2 907 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 POTEFA5A3E0 1075 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 KCNQ3O43525 872 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ADCY3O60266 1144 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 DGKIO75912 1065 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ANXA1P04083 346 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 SMIM18P0DKX4 95 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 CRABP2P29373 138 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 FOXN2P32314 431 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 CDC16Q13042 620 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 HNRNPDQ14103 355 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 FAM209AQ5JX71 171 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 HGSNATQ68CP4 663 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 C1orf228Q6PIY5 440 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 OTUD6AQ7L8S5 288 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 WDR75Q8IWA0 830 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ZNF713Q8N859 430 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ANKRD42Q8N9B4 389 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 PLEKHO2Q8TD55 490 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 BAP1Q92560 729 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 ARHGEF2Q92974 986 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 LRRC59Q96AG4 307 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 EEF2KMTQ96G04 330 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 SH3GL1Q99961 368 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 NT5C3AQ9H0P0 336 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 SIK3Q9Y2K2 1263 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 SUGT1Q9Y2Z0 365 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 UTP11Q9Y3A2 253 aaKnown RBP8.33□□□□□ -1.08
PTPRK-219ENST00000531050 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
PTPRK-219ENST00000531050 NWD2Q9ULI1 1742 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 RASGRF2O14827 1237 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 MAPK13O15264 365 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 VDRP11473 427 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CDR2Q01850 454 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 LPIN1Q14693 890 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 AKAP4Q5JQC9 854 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 SYCP2LQ5T4T6 812 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 APOA5Q6Q788 366 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ZDHHC24Q6UX98 284 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CROCCP2Q86T23 111 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 RSPH3Q86UC2 560 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ANKLE2Q86XL3 938 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ALDH16A1Q8IZ83 802 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 OXER1Q8TDS5 423 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 MAGEB18Q96M61 343 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 FNBP1Q96RU3 617 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 SLC26A6Q9BXS9 759 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms