RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SKOR2Q2VWA4 1001 aaPredicted RBP18.63■□□□□ 0.57
SF3B2-211ENST00000531041 CATSPER4Q7RTX7 472 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 DBF4BQ8NFT6 615 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 SEPT8Q92599 483 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 APBB2Q92870 758 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 HPS3Q969F9 1004 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 HVCN1Q96D96 273 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 PCDH10Q9P2E7 1040 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 PCDHB13Q9Y5F0 798 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 PTPRSQ13332 1948 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 ACKR2O00590 384 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 AXLP30530 894 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 CASP5P51878 434 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 STRN3Q13033 797 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 ZC2HC1CQ53FD0 456 aaPredicted RBP18.62■□□□□ 0.57
SF3B2-211ENST00000531041 STXBP4Q6ZWJ1 553 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 EPM2AIP1Q7L775 607 aaPredicted RBP18.62■□□□□ 0.57
SF3B2-211ENST00000531041 FGFBP2Q9BYJ0 223 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 SLC39A2Q9NP94 309 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 AGPAT5Q9NUQ2 364 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 TBX20Q9UMR3 447 aa18.62■□□□□ 0.57
SF3B2-211ENST00000531041 TTC3P53804 2025 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 EIF3DO15371 548 aaKnown RBP eCLIP18.61■□□□□ 0.57
SF3B2-211ENST00000531041 TSPAN1O60635 241 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 MYBP10242 640 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 NCBP1Q09161 790 aaKnown RBP18.61■□□□□ 0.57
SF3B2-211ENST00000531041 STK4Q13043 487 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 CNKSR3Q6P9H4 555 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 KIAA0895Q8NCT3 520 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 GLIS3Q8NEA6 775 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 FTHL17Q9BXU8 183 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 GTPBP4Q9BZE4 634 aaKnown RBP18.61■□□□□ 0.57
SF3B2-211ENST00000531041 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 CHST12Q9NRB3 414 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
SF3B2-211ENST00000531041 EDN1P05305 212 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 ARF4P18085 180 aaPredicted RBP18.6■□□□□ 0.57
SF3B2-211ENST00000531041 HOXA11P31270 313 aaPredicted RBP18.6■□□□□ 0.57
SF3B2-211ENST00000531041 PRPF4BQ13523 1007 aaKnown RBP18.6■□□□□ 0.57
SF3B2-211ENST00000531041 CCDC183Q5T5S1 534 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 L1TD1Q5T7N2 865 aaKnown RBP18.6■□□□□ 0.57
SF3B2-211ENST00000531041 RBM43Q6ZSC3 357 aaKnown RBP18.6■□□□□ 0.57
SF3B2-211ENST00000531041 C16orf59Q7L2K0 433 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 MAP4K3Q8IVH8 894 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 ZNF507Q8TCN5 953 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 MRPL4Q9BYD3 311 aaKnown RBP18.6■□□□□ 0.57
SF3B2-211ENST00000531041 TMEM63CQ9P1W3 806 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 MAN1B1Q9UKM7 699 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 UBE4BO95155 1302 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 CITO14578 2027 aa18.6■□□□□ 0.57
SF3B2-211ENST00000531041 TRIP11Q15643 1979 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 H0YGN5 161 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 RBAK-RBAKDNI3L0D1 243 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 B4GALT5O43286 388 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 ACRP10323 421 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 MAGEA10P43363 369 aaPredicted RBP18.59■□□□□ 0.57
SF3B2-211ENST00000531041 DSC3Q14574 896 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 ZNF658Q5TYW1 1059 aaPredicted RBP18.59■□□□□ 0.57
SF3B2-211ENST00000531041 ZPBP2Q6X784 338 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 TRIML1Q8N9V2 468 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 SCFD1Q8WVM8 642 aa18.59■□□□□ 0.57
SF3B2-211ENST00000531041 SYAP1Q96A49 352 aaPredicted RBP18.59■□□□□ 0.57
SF3B2-211ENST00000531041 ACO2Q99798 780 aaKnown RBP18.59■□□□□ 0.57
SF3B2-211ENST00000531041 PIN4Q9Y237 131 aaKnown RBP18.59■□□□□ 0.57
SF3B2-211ENST00000531041 A0A1B0GUA9 196 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 TTLL13PA6NNM8 815 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 PRPF6O94906 941 aaKnown RBP18.58■□□□□ 0.57
SF3B2-211ENST00000531041 PIGRP01833 764 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 ZSCAN20P17040 1043 aaPredicted RBP18.58■□□□□ 0.57
SF3B2-211ENST00000531041 EPHB4P54760 987 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 KCNA1Q09470 495 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 MORC3Q14149 939 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 IKBKEQ14164 716 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 BMT2Q1RMZ1 405 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 TCTN1Q2MV58 587 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 CAVIN1Q6NZI2 390 aaKnown RBP18.58■□□□□ 0.57
SF3B2-211ENST00000531041 NOTUMQ6P988 496 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 PSRC1Q6PGN9 363 aaPredicted RBP18.58■□□□□ 0.57
SF3B2-211ENST00000531041 ACCSQ96QU6 501 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 TMEM206Q9H813 350 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 EXOC7Q9UPT5 735 aa18.58■□□□□ 0.57
SF3B2-211ENST00000531041 ABHD14A-ACY1A0A1B0GW23 586 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 MGEA5O60502 916 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 FGBP02675 491 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 ACTN1P12814 892 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 COBLL1Q53SF7 1204 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 TMEM240Q5SV17 173 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 ATF7IP2Q5U623 682 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 ZNF365Q70YC5 407 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 RTN4RL1Q86UN2 441 aaPredicted RBP18.57■□□□□ 0.56
SF3B2-211ENST00000531041 CCDC51Q96ER9 411 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 CPB2Q96IY4 423 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 ADAM2Q99965 735 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 GDF15Q99988 308 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 TARS2Q9BW92 718 aaKnown RBP18.57■□□□□ 0.56
SF3B2-211ENST00000531041 TRAIPQ9BWF2 469 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 TSPYL2Q9H2G4 693 aaPredicted RBP18.57■□□□□ 0.56
SF3B2-211ENST00000531041 RGS18Q9NS28 235 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 TNFSF13BQ9Y275 285 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 USP20Q9Y2K6 914 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms