RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SNRNP27Q8WVK2 155 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ERP27Q96DN0 273 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ABHD8Q96I13 439 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 MPP4Q96JB8 637 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TGS1Q96RS0 853 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 PACSIN2Q9UNF0 486 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 FLT1P17948 1338 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 SCN7AQ01118 1682 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 TRIM43BA6NCK2 446 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 F8W8V4 182 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 H0Y3Z8 333 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 TBX10O75333 385 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 RARGP13631 454 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 XBP1P17861 261 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 NAT1P18440 290 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 TARSP26639 723 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 DCTN2Q13561 401 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 RTN1Q16799 776 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 TMEM67Q5HYA8 995 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 OLFML1Q6UWY5 402 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 B3GNT6Q6ZMB0 384 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 NUP93Q8N1F7 819 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 GAB3Q8WWW8 586 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF594Q96JF6 807 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 SNX27Q96L92 541 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 STRBPQ96SI9 672 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 GPCPD1Q9NPB8 672 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 DISC1Q9NRI5 854 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 EMILIN3Q9NT22 766 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 ARFGEF1Q9Y6D6 1849 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 KIAA0391O15091 583 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 LGR5O75473 907 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 SUPT3HO75486 399 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 CDK4P11802 303 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 TAC1P20366 129 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 SLC45A4Q5BKX6 768 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 CFAP157Q5JU67 520 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 MFSD4BQ5TF39 518 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 Q6ZNX1 250 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 HS2ST1Q7LGA3 356 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 CROCCP3Q8IVE0 287 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 MAP7D3Q8IWC1 876 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 EPS8L3Q8TE67 593 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 HES6Q96HZ4 224 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 CGREF1Q99674 301 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 AP1M1Q9BXS5 423 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 BTBD7Q9P203 1132 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 ZNHIT2Q9UHR6 403 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 ANGPTL2Q9UKU9 493 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 R3HDM2Q9Y2K5 976 aaKnown RBP8.72□□□□□ -1.01
CSDE1-214ENST00000530886 ADGRA3Q8IWK6 1321 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 NUP98P52948 1817 aa8.72□□□□□ -1.01
CSDE1-214ENST00000530886 MEGF6O75095 1541 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 SLIT2O94813 1529 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 A0A087WZG4 1122 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 E9PBE3 544 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 CAPN9O14815 690 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 NOL4O94818 638 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 GTF2H1P32780 548 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 SLC18A1P54219 525 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 DSG1Q02413 1049 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 STRN3Q13033 797 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 PTGDRQ13258 359 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 UBE3CQ15386 1083 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 ACSBG2Q5FVE4 666 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 TMEM53Q6P2H8 277 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 PPP1R21Q6ZMI0 780 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 ARHGEF18Q6ZSZ5 1173 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 TRMT10CQ7L0Y3 403 aaKnown RBP8.71□□□□□ -1.01
CSDE1-214ENST00000530886 TMC4Q7Z404 712 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 BBS5Q8N3I7 341 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 RIBC1Q8N443 379 aaPredicted RBP8.71□□□□□ -1.01
CSDE1-214ENST00000530886 PDCD7Q8N8D1 485 aaKnown RBP8.71□□□□□ -1.01
CSDE1-214ENST00000530886 DEPTORQ8TB45 409 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 NRDE2Q9H7Z3 1164 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 SLC52A2Q9HAB3 445 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 GRHL1Q9NZI5 618 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 HESX1Q9UBX0 185 aa8.71□□□□□ -1.01
CSDE1-214ENST00000530886 ZNFX1Q9P2E3 1918 aaKnown RBP8.71□□□□□ -1.01
CSDE1-214ENST00000530886 ZPR1O75312 459 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 ZWINTO95229 277 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 ITGA4P13612 1032 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 SH3D19Q5HYK7 790 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 CENPPQ6IPU0 288 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 ADGRG6Q86SQ4 1221 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 PLBD2Q8NHP8 589 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 ESR2Q92731 530 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 MIPEPQ99797 713 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 ECSITQ9BQ95 431 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 FGFR1OPO95684 399 aaKnown RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 PCCAP05165 728 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 UBTFL6P0CB48 400 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms