RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 AFF1P51825 1210 aaKnown RBP16.71■□□□□ 0.27
CAPN1-219ENST00000530495 NPEPPSP55786 919 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 INF2Q27J81 1249 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 KRT25Q7Z3Z0 450 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 ZNF579Q8NAF0 562 aaKnown RBP16.71■□□□□ 0.27
CAPN1-219ENST00000530495 FEZF2Q8TBJ5 459 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 TMEM175Q9BSA9 504 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 DHX33Q9H6R0 707 aaKnown RBP16.71■□□□□ 0.27
CAPN1-219ENST00000530495 SFXN1Q9H9B4 322 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 VAV3Q9UKW4 847 aa16.71■□□□□ 0.27
CAPN1-219ENST00000530495 CNTNAP2Q9UHC6 1331 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 ZFHX2Q9C0A1 2572 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 CACNA1HO95180 2353 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 P4HBP07237 508 aaKnown RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 CNPP09543 421 aaKnown RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 SRGAP2CP0DJJ0 459 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 KLRC2P26717 231 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 RFC5P40937 340 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 UBXN11Q5T124 520 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 PPP4R3AQ6IN85 833 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 OTOP3Q7RTS5 596 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 ACSF2Q96CM8 615 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 CEP170P1Q96L14 293 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 AIFM3Q96NN9 605 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 MINDY3Q9H8M7 445 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 RSAD1Q9HA92 442 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 KCNMB3Q9NPA1 279 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 MRPL17Q9NRX2 175 aaKnown RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 WRAP73Q9P2S5 460 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-219ENST00000530495 FAN1Q9Y2M0 1017 aa16.7■□□□□ 0.26
CAPN1-219ENST00000530495 C2orf16Q68DN1 1984 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 NRP1O14786 923 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 ASAP2O43150 1006 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
CAPN1-219ENST00000530495 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
CAPN1-219ENST00000530495 NBL1P41271 181 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 LAMTOR4Q0VGL1 99 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 LETM2Q2VYF4 491 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 C15orf39Q6ZRI6 1047 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 C4orf19Q8IY42 314 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 PSPC1Q8WXF1 523 aaKnown RBP16.69■□□□□ 0.26
CAPN1-219ENST00000530495 TMEM143Q96AN5 459 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 SNX27Q96L92 541 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 SLKQ9H2G2 1235 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-219ENST00000530495 MFSD1Q9H3U5 465 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 UBN1Q9NPG3 1134 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
CAPN1-219ENST00000530495 TBX3O15119 743 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
CAPN1-219ENST00000530495 GCFC2P16383 781 aaKnown RBP16.68■□□□□ 0.26
CAPN1-219ENST00000530495 TDGQ13569 410 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 EPHA7Q15375 998 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 CPLX2Q6PUV4 134 aaKnown RBP16.68■□□□□ 0.26
CAPN1-219ENST00000530495 CCDC149Q6ZUS6 474 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 OTUD6AQ7L8S5 288 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 TCP11Q8WWU5 503 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 HAS1Q92839 578 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
CAPN1-219ENST00000530495 PHF20Q9BVI0 1012 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 KCNJ14Q9UNX9 436 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 SSX2IPQ9Y2D8 614 aa16.68■□□□□ 0.26
CAPN1-219ENST00000530495 CCDC194A0A1B0GVG4 234 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 INPPL1O15357 1258 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 GAS2O43903 313 aaKnown RBP16.67■□□□□ 0.26
CAPN1-219ENST00000530495 EFEMP2O95967 443 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 POMCP01189 267 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 SOD2P04179 222 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 YWHABP31946 246 aaKnown RBP16.67■□□□□ 0.26
CAPN1-219ENST00000530495 PCBP1Q15365 356 aaKnown RBP eCLIP16.67■□□□□ 0.26
CAPN1-219ENST00000530495 ASCL5Q7RTU5 278 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 SMG8Q8ND04 991 aaKnown RBP16.67■□□□□ 0.26
CAPN1-219ENST00000530495 CMASQ8NFW8 434 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-219ENST00000530495 RPS6KC1Q96S38 1066 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 KCNK12Q9HB15 430 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 CFAP54Q96N23 3096 aa16.67■□□□□ 0.26
CAPN1-219ENST00000530495 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 ITGA4P13612 1032 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 NPR3P17342 541 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 AXLP30530 894 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 STK3Q13188 491 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 KIAA0319Q5VV43 1072 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 CYP26C1Q6V0L0 522 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 TAS1R1Q7RTX1 841 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 RNF149Q8NC42 400 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 NAP1L4Q99733 375 aaKnown RBP16.66■□□□□ 0.26
CAPN1-219ENST00000530495 RHOBTB2Q9BYZ6 727 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 MARCH5Q9NX47 278 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 RGL1Q9NZL6 768 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 IGSF9Q9P2J2 1179 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 DPP7Q9UHL4 492 aa16.66■□□□□ 0.26
CAPN1-219ENST00000530495 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 PRR23AA6NEV1 266 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms