RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 DUSP9Q99956 384 aaKnown RBP11.69□□□□□ -0.54
SOX6-213ENST00000530378 TARS2Q9BW92 718 aaKnown RBP11.69□□□□□ -0.54
SOX6-213ENST00000530378 CCDC113Q9H0I3 377 aa11.69□□□□□ -0.54
SOX6-213ENST00000530378 PCIF1Q9H4Z3 704 aa11.69□□□□□ -0.54
SOX6-213ENST00000530378 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
SOX6-213ENST00000530378 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
SOX6-213ENST00000530378 FANCLQ9NW38 375 aa11.69□□□□□ -0.54
SOX6-213ENST00000530378 UBE4BO95155 1302 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 M0QZ92 97 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 KIF20AO95235 890 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 COL6A1P12109 1028 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 ERCC5P28715 1186 aaPredicted RBP11.68□□□□□ -0.54
SOX6-213ENST00000530378 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
SOX6-213ENST00000530378 LIG4P49917 911 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 TLE2Q04725 743 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 GSE1Q14687 1217 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 ZCWPW2Q504Y3 356 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 COBLL1Q53SF7 1204 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 CENPPQ6IPU0 288 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 ZBTB33Q86T24 672 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 RSPH3Q86UC2 560 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 CSGALNACT2Q8N6G5 542 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 ZBTB45Q96K62 511 aaPredicted RBP11.68□□□□□ -0.54
SOX6-213ENST00000530378 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 NTPCRQ9BSD7 190 aaKnown RBP11.68□□□□□ -0.54
SOX6-213ENST00000530378 GBP3Q9H0R5 595 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 C2orf40Q9H1Z8 148 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 TYW1Q9NV66 732 aaKnown RBP11.68□□□□□ -0.54
SOX6-213ENST00000530378 UMODL1Q5DID0 1318 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
SOX6-213ENST00000530378 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 GOLGA8IPA6NC78 632 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 GOLGA8JA6NMD2 632 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ASAP2O43150 1006 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 CHRNA1P02708 482 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 NR3C1P04150 777 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ATP1A3P13637 1013 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 IBSPP21815 317 aaPredicted RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 NR2F2P24468 414 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 CDK7P50613 346 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 PTPN11Q06124 597 aaPredicted RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 PTK7Q13308 1070 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ALCAMQ13740 583 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 SNX17Q15036 470 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 MAPK6Q16659 721 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 LRRC26Q2I0M4 334 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 HS2ST1Q7LGA3 356 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ZNF410Q86VK4 478 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 SLC17A8Q8NDX2 589 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 SRRTQ9BXP5 876 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 CELF4Q9BZC1 486 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 GCOM2Q9BZD3 368 aaPredicted RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 GTPBP4Q9BZE4 634 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ST6GALNAC4Q9H4F1 302 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 AGPAT3Q9NRZ7 376 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 TRPV2Q9Y5S1 764 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 H0YCG3 227 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ERLIN2O94905 339 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 GHRP10912 638 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 CASP4P49662 377 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 EFNA5P52803 228 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 SEZ6Q53EL9 994 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 EEF1DP3Q658K8 133 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 CEP135Q66GS9 1140 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 HSD3B7Q9H2F3 369 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 TMEM206Q9H813 350 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 EXOC7Q9UPT5 735 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
SOX6-213ENST00000530378 TET1Q8NFU7 2136 aa11.67□□□□□ -0.54
SOX6-213ENST00000530378 PDXKO00764 312 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 CALUO43852 315 aaPredicted RBP11.66□□□□□ -0.54
SOX6-213ENST00000530378 TSPAN1O60635 241 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 CKBP12277 381 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 ADSSP30520 456 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 PPP1R2P41236 205 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 LRRC63Q05C16 580 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 AMHR2Q16671 573 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 SPATA1Q5VX52 437 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 ARMCX5Q6P1M9 558 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 LRRC55Q6ZSA7 311 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 NECAB2Q7Z6G3 386 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 RDH13Q8NBN7 331 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
SOX6-213ENST00000530378 POMGNT1Q8WZA1 660 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 HVCN1Q96D96 273 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 TCHPQ9BT92 498 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms