RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 KIAA1210Q9ULL0 1709 aa16.45■□□□□ 0.22
PCDHA4-203ENST00000530339 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 AP2B1P63010 937 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 TAP1Q03518 808 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 MTMR1Q13613 665 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 SBK1Q52WX2 424 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 AGBL2Q5U5Z8 902 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 PADI6Q6TGC4 694 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 RBM43Q6ZSC3 357 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 MS4A14Q96JA4 679 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 G3BP2Q9UN86 482 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 LOC102724159A0A0B4J2E5 919 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 ABL1P00519 1130 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 PSMA2P25787 234 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 PWP2Q15269 919 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 DCLK2Q8N568 766 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 FAF2Q96CS3 445 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 CPVLQ9H3G5 476 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 ABCA9Q8IUA7 1624 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 COPB2P35606 906 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 PEX3P56589 373 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 SCARF1Q14162 830 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 KYAT1Q16773 422 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 PHF20Q9BVI0 1012 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 MRPL46Q9H2W6 279 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 WDR46O15213 610 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 KRT14P02533 472 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 KIAA1755Q5JYT7 1200 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 RSRC2Q7L4I2 434 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 IGDCC4Q8TDY8 1250 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 MAP3K14Q99558 947 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 INTS2Q9H0H0 1204 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 ANLNQ9NQW6 1124 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 DDX56Q9NY93 547 aaKnown RBP16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 SENP1Q9P0U3 644 aa16.44■□□□□ 0.22
PCDHA4-203ENST00000530339 NRBF2Q96F24 287 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 NDE1Q9NXR1 346 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 FAM8A1Q9UBU6 413 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 HSPA4LO95757 839 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 SOX5P35711 763 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 KIAA1841Q6NSI8 718 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 ZIM3Q96PE6 472 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 ZWILCHQ9H900 591 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 CAMSAP1Q5T5Y3 1602 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 SNAP23O00161 211 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 PDXKO00764 312 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 FAM107AO95990 144 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 PRDX5P30044 214 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 STAT4Q14765 748 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 SEC16BQ96JE7 1060 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 TSPOAP1O95153 1857 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 TCP11X1B4DZS4 312 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 STXBP2Q15833 593 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 SYDE1Q6ZW31 735 aaPredicted RBP16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 IL17RAQ96F46 866 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 FAM161BQ96MY7 647 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 OLFM3Q96PB7 478 aa16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 XPO6Q96QU8 1125 aaKnown RBP16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 GCOM2Q9BZD3 368 aaPredicted RBP16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 PDS5AQ29RF7 1337 aaKnown RBP16.43■□□□□ 0.22
PCDHA4-203ENST00000530339 HNRNPCL1O60812 293 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 GH2P01242 217 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 KLC3Q6P597 504 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 HEXIM2Q96MH2 286 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 MRPL40Q9NQ50 206 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 CHN1P15882 459 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 EEF1B2P24534 225 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 PPARGP37231 505 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 WDR93Q6P2C0 686 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 PRMT1Q99873 361 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 TTC7AQ9ULT0 858 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 CEP152O94986 1710 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 GNGT2O14610 69 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 CEP70Q8NHQ1 597 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 NSUN6Q8TEA1 469 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 SH3GL3Q99963 347 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 IP6K2Q9UHH9 426 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 CPSF3Q9UKF6 684 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 USP15Q9Y4E8 981 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 PAMP19021 973 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 PDCD2Q16342 344 aaPredicted RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 CYFIP2Q96F07 1278 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-203ENST00000530339 ORC6Q9Y5N6 252 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms