RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 POTEAQ6S8J7 498 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 C16orf89Q6UX73 402 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 C20orf96Q9NUD7 363 aaPredicted RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 ZNF862O60290 1169 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 CNDP1Q96KN2 507 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 MFAP3LO75121 409 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 ABCE1P61221 599 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 SH3KBP1Q96B97 665 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 NMD3Q96D46 503 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 TCN1P20061 433 aaPredicted RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 VSNL1P62760 191 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 CCDC59Q9P031 241 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 TRPC4Q9UBN4 977 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 STMND1H3BQB6 276 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 CTIFO43310 598 aaKnown RBP13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 CCDC166P0CW27 439 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 RFC4P35249 363 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 WLSQ5T9L3 541 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 POLNQ7Z5Q5 900 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 ADPGKQ9BRR6 497 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 AP1S1P61966 158 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
PDE4DIP-227ENST00000529945 AXIN1O15169 862 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CCDC127Q96BQ5 260 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 KRCC1Q9NPI7 259 aaPredicted RBP13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CITO14578 2027 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 MAP3K13O43283 966 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TJP3O95049 919 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TAF5Q15542 800 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 AASDHQ4L235 1098 aaPredicted RBP13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 MFN1Q8IWA4 741 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CCSER2Q9H7U1 834 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TNNQ9UQP3 1299 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 ENO3P13929 434 aaPredicted RBP13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 GJA8P48165 433 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CRYMQ14894 314 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 FAM172AQ8WUF8 416 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 THTPAQ9BU02 230 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 LRRC6Q86X45 466 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CATSPER2Q96P56 530 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 ETAA1Q9NY74 926 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 PDP2Q9P2J9 529 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TCP11X1B4DZS4 312 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 SAMD3Q8N6K7 520 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 RALGAPBQ86X10 1494 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 ARHGDIBP52566 201 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TTC29Q8NA56 475 aaPredicted RBP13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CCDC115Q96NT0 180 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 PRELID1Q9Y255 219 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 IVNS1ABPQ9Y6Y0 642 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TRIM49BA6NDI0 452 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 TRIM49D1C9J1S8 452 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 CCND1P24385 295 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 S100A2P29034 98 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 RUNDC3AQ59EK9 446 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 MSANTD1Q6ZTZ1 278 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 IQCF2Q8IXL9 164 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 C12orf4Q9NQ89 552 aa13.38□□□□□ -0.27
PDE4DIP-227ENST00000529945 C1orf232A0A0U1RR37 186 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 TRIM3O75382 744 aaPredicted RBP13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 CSPG5O95196 566 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 TGFBR2P37173 567 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 QARSP47897 775 aaKnown RBP13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 BPIFB4P59827 614 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 HPCAP84074 193 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 EMBQ6PCB8 327 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 IL1RAPL1Q9NZN1 696 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 IFNA14P01570 189 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 NEK5Q6P3R8 708 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 POMGNT2Q8NAT1 580 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 SNX4O95219 450 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 ARPP19P56211 112 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 THEMIS2Q5TEJ8 643 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 SHQ1Q6PI26 577 aaKnown RBP13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 MIEF2Q96C03 454 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 AHCYL1O43865 530 aa13.37□□□□□ -0.27
PDE4DIP-227ENST00000529945 MLNP12872 115 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms