RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CNKSR3Q6P9H4 555 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 RUFY4Q6ZNE9 571 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 RBM43Q6ZSC3 357 aaKnown RBP8.7□□□□□ -1.02
SSBP3-211ENST00000528787 SFR1Q86XK3 245 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 FAM114A1Q8IWE2 563 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 C7orf61Q8IZ16 206 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TMEM161BQ8NDZ6 487 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 ZNF507Q8TCN5 953 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 GPT2Q8TD30 523 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TMEM174Q8WUU8 243 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 OSMRQ99650 979 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 SH2D3AQ9BRG2 576 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TCHPQ9BT92 498 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TRAIPQ9BWF2 469 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 GBP3Q9H0R5 595 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 BLZF1Q9H2G9 400 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 ADAMTS10Q9H324 1103 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 FZD8Q9H461 694 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TOPORSQ9NS56 1045 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TBX20Q9UMR3 447 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 CNTNAP2Q9UHC6 1331 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 SIP14410 1827 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 CLDN3O15551 220 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 XPOTO43592 962 aaKnown RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 GNA14O95837 355 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 EOMESO95936 686 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 CXCL10P02778 98 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 TPM2P07951 284 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 CTSHP09668 335 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 GARTP22102 1010 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 ERCC5P28715 1186 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 KCNJ6P48051 423 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 YARSP54577 528 aaKnown RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 NLRP12P59046 1061 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 EHHADHQ08426 723 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 MGAT3Q09327 533 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 SURF1Q15526 300 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 CAMK4Q16566 473 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 NFIL3Q16649 462 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 TPD52L1Q16890 204 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 KNOP1Q1ED39 458 aaKnown RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 EDRF1Q3B7T1 1238 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 SLC27A1Q6PCB7 646 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 CD302Q8IX05 232 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 DAW1Q8N136 415 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 ANKRD20A12PQ8NF67 263 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 ASAP3Q8TDY4 903 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 NOC3LQ8WTT2 800 aaKnown RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 STAMQ92783 540 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 IL23AQ9NPF7 189 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 GPRC5CQ9NQ84 441 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 AGPAT5Q9NUQ2 364 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 TYW1Q9NV66 732 aaKnown RBP8.69□□□□□ -1.02
SSBP3-211ENST00000528787 TNFSF13BQ9Y275 285 aa8.69□□□□□ -1.02
SSBP3-211ENST00000528787 A0A087WWV3 80 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 NPHP3-ACAD11A0A0J9YXS1 232 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 A0A1B0GUA9 196 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 KLRC4O43908 158 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 STX10O60499 249 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 CHRNA1P02708 482 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 AMHP03971 560 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 MCF2P10911 925 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 ENPEPQ07075 957 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 TMEM62Q0P6H9 643 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 PAK1Q13153 545 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 MKRN4PQ13434 485 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 MORC3Q14149 939 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 NOLC1Q14978 699 aaKnown RBP eCLIP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 PLEKHG4Q58EX7 1191 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 ATF7IP2Q5U623 682 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 TWF2Q6IBS0 349 aaKnown RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 MPZL3Q6UWV2 235 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 SLC24A5Q71RS6 500 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 C12orf56Q8IXR9 622 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 PHOSPHO2Q8TCD6 241 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 DHX38Q92620 1227 aaKnown RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 CCDC94Q9BW85 323 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 PPP1R12CQ9BZL4 782 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 CCDC113Q9H0I3 377 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 ELAC1Q9H777 363 aaKnown RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 SLC39A2Q9NP94 309 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 LRFN2Q9ULH4 789 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 ST3GAL5Q9UNP4 418 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 PIN4Q9Y237 131 aaKnown RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 FRMD4BQ9Y2L6 1034 aa8.68□□□□□ -1.02
SSBP3-211ENST00000528787 R3HCC1Q9Y3T6 440 aaKnown RBP8.68□□□□□ -1.02
SSBP3-211ENST00000528787 SMTNL1A8MU46 457 aa8.67□□□□□ -1.02
SSBP3-211ENST00000528787 CETN3O15182 167 aa8.67□□□□□ -1.02
SSBP3-211ENST00000528787 MAPK13O15264 365 aa8.67□□□□□ -1.02
SSBP3-211ENST00000528787 ZNF623O75123 536 aa8.67□□□□□ -1.02
SSBP3-211ENST00000528787 PPP1R37O75864 691 aa8.67□□□□□ -1.02
SSBP3-211ENST00000528787 FGBP02675 491 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms