RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 TMOD2Q9NZR1 351 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 ZNF70Q9UC06 446 aaPredicted RBP8.05□□□□□ -1.12
C11orf54-207ENST00000528288 TMX2Q9Y320 296 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 MYH11P35749 1972 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 FRMPD4Q14CM0 1322 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
C11orf54-207ENST00000528288 ATP9AO75110 1047 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 MMEP08473 750 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 VIL1P09327 827 aaKnown RBP8.05□□□□□ -1.12
C11orf54-207ENST00000528288 TMEM253P0C7T8 217 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 COMTP21964 271 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 VAMP7P51809 220 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 PPATQ06203 517 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 DLGAP5Q15398 846 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 SEMA4DQ92854 862 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 LRRC45Q96CN5 670 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 FMO2Q99518 471 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 ZNF341Q9BYN7 854 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 TRIM7Q9C029 511 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 DAAM1Q9Y4D1 1078 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 HMGB1P1B2RPK0 211 aaPredicted RBP8.05□□□□□ -1.12
C11orf54-207ENST00000528288 PIK3CDO00329 1044 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 KIAA0754O94854 1291 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 TTC27Q6P3X3 843 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 NOP9Q86U38 636 aaKnown RBP8.05□□□□□ -1.12
C11orf54-207ENST00000528288 RASGEF1CQ8N431 466 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 DMAC2Q9NW81 257 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 HSPBP1Q9NZL4 362 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
C11orf54-207ENST00000528288 SLX4Q8IY92 1834 aa8.05□□□□□ -1.12
C11orf54-207ENST00000528288 DLATP10515 647 aaKnown RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 PYGMP11217 842 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 VPS41P49754 854 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 IFI35P80217 286 aaPredicted RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 C1orf220Q5T0J3 134 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 HAUS6Q7Z4H7 955 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 JAMLQ86YT9 394 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 TAAR1Q96RJ0 339 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 SYT11Q9BT88 431 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 SEMA4AQ9H3S1 761 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 MRPL11Q9Y3B7 192 aaKnown RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 SPATA31A6Q5VVP1 1343 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 SPDYE6P0CI01 402 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 POU5F1Q01860 360 aaKnown RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 C1orf54Q8WWF1 131 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 RAPGEF5Q92565 580 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 AKT1S1Q96B36 256 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 PWWP2AQ96N64 755 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 TMEM117Q9H0C3 514 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 MLXIPLQ9NP71 852 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 NRXN2Q9P2S2 1712 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 CCDC188H7C350 402 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 ENTPD3O75355 529 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 CHRNB2P17787 502 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 GJC1P36383 396 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 IFNAR2P48551 515 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 ADCY1Q08828 1119 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 SLC29A2Q14542 456 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 XKR9Q5GH70 373 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 OTUD6AQ7L8S5 288 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 CD302Q8IX05 232 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 CHURC1Q8WUH1 139 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 RNF25Q96BH1 459 aaPredicted RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 CYFIP2Q96F07 1278 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 KREMEN1Q96MU8 473 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 RANBP17Q9H2T7 1088 aaKnown RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 AZI2Q9H6S1 392 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 VCPKMTQ9H867 229 aa8.04□□□□□ -1.12
C11orf54-207ENST00000528288 DBR1Q9UK59 544 aaKnown RBP8.04□□□□□ -1.12
C11orf54-207ENST00000528288 GTPBP10A4D1E9 387 aaKnown RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 ANKRD62A6NC57 917 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 SPOPO43791 374 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 KRT5P13647 590 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 HOXA7P31268 230 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 RPL21P46778 160 aaKnown RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 ZNF131P52739 623 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 MRPS9P82933 396 aaKnown RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 PRUNE1Q86TP1 453 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 LARGE2Q8N3Y3 721 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 PRELID2Q8N945 189 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 MGARPQ8TDB4 240 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 EPS8L3Q8TE67 593 aaKnown RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 ATG4AQ8WYN0 398 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 TATDN2Q93075 761 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 CALR3Q96L12 384 aaKnown RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 ERP44Q9BS26 406 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 MTFR1LQ9H019 292 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 GGT7Q9UJ14 662 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 A0A0A6YYK5 440 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 HGSO14964 777 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 COL11A2P13942 1736 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 VCAM1P19320 739 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 RARRES1P49788 294 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
C11orf54-207ENST00000528288 WNK4Q96J92 1243 aa8.03□□□□□ -1.12
C11orf54-207ENST00000528288 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms