RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PPP2R3CQ969Q6 453 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 PABPC5Q96DU9 382 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 CSRNP2Q9H175 543 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 FZD8Q9H461 694 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 UBE2ZQ9H832 354 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 PRMT7Q9NVM4 692 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 SPG21Q9NZD8 308 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 KANSL3Q9P2N6 904 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 PUF60Q9UHX1 559 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 TCF20Q9UGU0 1960 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 MYH11P35749 1972 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 A0A1B0GUA9 196 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 E9PMD0 336 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 DNAJB1P25685 340 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 CDC25AP30304 524 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 TFF2Q03403 129 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 KRT17Q04695 432 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 NOMO2Q5JPE7 1267 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 LPPQ93052 612 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 IFT74Q96LB3 600 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 TIPINQ9BVW5 301 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 RSAD1Q9HA92 442 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 HCSTQ9UBK5 93 aa13.4□□□□□ -0.26
TRAPPC4-209ENST00000528230 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 BRWD1Q9NSI6 2320 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 ITGA4P13612 1032 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 LONP1P36776 959 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 EFNA5P52803 228 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 SF3A1Q15459 793 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 MAPK6Q16659 721 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 RINT1Q6NUQ1 792 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 C1orf186Q6ZWK4 172 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 HACE1Q8IYU2 909 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 SLC39A11Q8N1S5 342 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 SMG8Q8ND04 991 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 DEPTORQ8TB45 409 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 URGCPQ8TCY9 931 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 BSNDQ8WZ55 320 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 PNMA5Q96PV4 448 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 IPPQ9Y573 584 aa13.39□□□□□ -0.27
TRAPPC4-209ENST00000528230 ACKR2O00590 384 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 FSCN2O14926 492 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 INPPL1O15357 1258 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 IRS1P35568 1242 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 UBA7P41226 1012 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 KCNQ1P51787 676 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 BCAR1P56945 870 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 HYAL1Q12794 435 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 RESTQ13127 1097 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 PUS10Q3MIT2 529 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 LONRF3Q496Y0 759 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 SLC27A1Q6PCB7 646 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 CABP7Q86V35 215 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 MICAL1Q8TDZ2 1067 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 EIF2AQ9BY44 585 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 TRIM6Q9C030 488 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 NGRNQ9NPE2 291 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 KCND2Q9NZV8 630 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 MTMR6Q9Y217 621 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 GIT1Q9Y2X7 761 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 UNC80Q8N2C7 3258 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
TRAPPC4-209ENST00000528230 REV3LO60673 3130 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 ZMYM2Q9UBW7 1377 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 FSD2A1L4K1 749 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 N4BP3O15049 544 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 B4GALT5O43286 388 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 STX6O43752 255 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 GALTP07902 379 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 KCNA5P22460 613 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 GUCY2CP25092 1073 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 ERVFC1P60507 584 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 ADAM15Q13444 863 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 PTPAQ15257 358 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 TMEM119Q4V9L6 283 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 ADAMTS19Q8TE59 1207 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 CALML4Q96GE6 196 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 CDCA3Q99618 268 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms