RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 BHMT2Q9H2M3 363 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 ENTPD7Q9NQZ7 604 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
CAPN1-213ENST00000527897 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 PER2O15055 1255 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 B4GALT5O43286 388 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 NCK2O43639 380 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 ZNF623O75123 536 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 OFD1O75665 1012 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 AXLP30530 894 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 PRPHP41219 470 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 NDUFV1P49821 464 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 KRT17Q04695 432 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 UBE3AQ05086 875 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 CDR2LQ86X02 465 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-213ENST00000527897 ZBTB8OSQ8IWT0 167 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
CAPN1-213ENST00000527897 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
CAPN1-213ENST00000527897 TLE6Q9H808 572 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 RSAD1Q9HA92 442 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 TBC1D13Q9NVG8 400 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 STK24Q9Y6E0 443 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 MUC3AQ02505 3323 aa17.21■□□□□ 0.35
CAPN1-213ENST00000527897 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 E9PMD0 336 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 ITGA4P13612 1032 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 ARF4P18085 180 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-213ENST00000527897 CYP11B2P19099 503 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 MUTP22033 750 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 ATP2C1P98194 919 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-213ENST00000527897 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-213ENST00000527897 CUL4AQ13619 759 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 PCBP1Q15365 356 aaKnown RBP eCLIP17.2■□□□□ 0.34
CAPN1-213ENST00000527897 AGMOQ6ZNB7 445 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 TMC7Q7Z402 723 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-213ENST00000527897 DEPTORQ8TB45 409 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 FAM193BQ96PV7 902 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-213ENST00000527897 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 DNM3Q9UQ16 869 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 HES2Q9Y543 173 aa17.2■□□□□ 0.34
CAPN1-213ENST00000527897 C5orf42Q9H799 3197 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 NPTXRO95502 500 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 POMCP01189 267 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 SSBP05455 408 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN1-213ENST00000527897 IL9P15248 144 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 NCLP19338 710 aaKnown RBP17.19■□□□□ 0.34
CAPN1-213ENST00000527897 AFF1P51825 1210 aaKnown RBP17.19■□□□□ 0.34
CAPN1-213ENST00000527897 PLCB3Q01970 1234 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 AMHR2Q16671 573 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
CAPN1-213ENST00000527897 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 SMG8Q8ND04 991 aaKnown RBP17.19■□□□□ 0.34
CAPN1-213ENST00000527897 BSNDQ8WZ55 320 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 TMEM169Q96HH4 297 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 PLIN2Q99541 437 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 NFKBIZQ9BYH8 718 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 NRDE2Q9H7Z3 1164 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 IPPQ9Y573 584 aa17.19■□□□□ 0.34
CAPN1-213ENST00000527897 TBX10O75333 385 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 LTBRP36941 435 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 ADAM15Q13444 863 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 CTC1Q2NKJ3 1217 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 ZNF280BQ86YH2 543 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 CNNM3Q8NE01 707 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 CCDC51Q96ER9 411 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 CDK5RAP3Q96JB5 506 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
CAPN1-213ENST00000527897 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 NXF3Q9H4D5 531 aaKnown RBP17.18■□□□□ 0.34
CAPN1-213ENST00000527897 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-213ENST00000527897 DNAJB4Q9UDY4 337 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 LZTS1Q9Y250 596 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 CNTNAP2Q9UHC6 1331 aa17.18■□□□□ 0.34
CAPN1-213ENST00000527897 NCOR1O75376 2440 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 GRXCR2A6NFK2 248 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 EYA4O95677 639 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 PRKCBP05771 671 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 PDCP20941 246 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 MLH1P40692 756 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 NAMPTP43490 491 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 SLC11A1P49279 550 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 COL19A1Q14993 1142 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 PUS10Q3MIT2 529 aaKnown RBP17.17■□□□□ 0.34
CAPN1-213ENST00000527897 PDE12Q6L8Q7 609 aaKnown RBP17.17■□□□□ 0.34
CAPN1-213ENST00000527897 LLGL2Q6P1M3 1020 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 SLC27A1Q6PCB7 646 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 BRAPQ7Z569 592 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 TMEM173Q86WV6 379 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-213ENST00000527897 HACE1Q8IYU2 909 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 EFHBQ8N7U6 833 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 RSPH1Q8WYR4 309 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms