RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 RSAD1Q9HA92 442 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 C11orf16Q9NQ32 467 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 XPNPEP1Q9NQW7 623 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 TBC1D13Q9NVG8 400 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 USP15Q9Y4E8 981 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-212ENST00000527887 IRAK3Q9Y616 596 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 C2orf71A6NGG8 1288 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 HIDE1A8MVS5 230 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 LOC730098B7Z3J9 87 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 ZC3H11AO75152 810 aaKnown RBP eCLIP15.78■□□□□ 0.12
CAPN1-212ENST00000527887 ALDH2P05091 517 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 GALTP07902 379 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 MUTP22033 750 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 PBX3P40426 434 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 CBX2Q14781 532 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-212ENST00000527887 TPRNQ4KMQ1 711 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 ANKRD54Q6NXT1 300 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 AGMOQ6ZNB7 445 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 CCDC83Q8IWF9 413 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 HACE1Q8IYU2 909 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 MCPH1Q8NEM0 835 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 LPPQ93052 612 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 IGSF21Q96ID5 467 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 NACC1Q96RE7 527 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 TMEM175Q9BSA9 504 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 POLR3CQ9BUI4 534 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-212ENST00000527887 DBR1Q9UK59 544 aaKnown RBP15.78■□□□□ 0.12
CAPN1-212ENST00000527887 STK24Q9Y6E0 443 aa15.78■□□□□ 0.12
CAPN1-212ENST00000527887 CXCL14O95715 111 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 CTSAP10619 480 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 MCM7P33993 719 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 TECP42680 631 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 UBXN11Q5T124 520 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 TMEM87AQ8NBN3 555 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 VN1R2Q8NFZ6 395 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 FAM193BQ96PV7 902 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-212ENST00000527887 CSRNP2Q9H175 543 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 S1PR5Q9H228 398 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 BMP2KQ9NSY1 1161 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-212ENST00000527887 INPP5FQ9Y2H2 1132 aa15.77■□□□□ 0.12
CAPN1-212ENST00000527887 KIAA1671Q9BY89 1806 aa15.77■□□□□ 0.11
CAPN1-212ENST00000527887 C5orf42Q9H799 3197 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 NT5C1B-RDH14C9J2C7 533 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 WNT7AO00755 349 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 INPPL1O15357 1258 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 TSPAN1O60635 241 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 OR52Z1P0C646 297 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 SPATA31C1P0DKV0 1188 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 ITGA4P13612 1032 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 RPA1P27694 616 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 FOSBP53539 338 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 GUCY1B3Q02153 619 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 ITIH3Q06033 890 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
CAPN1-212ENST00000527887 PPFIBP1Q86W92 1011 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 CATSPER3Q86XQ3 398 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 RNF135Q8IUD6 432 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 NOSTRINQ8IVI9 506 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 NOL7Q9UMY1 257 aaKnown RBP15.76■□□□□ 0.11
CAPN1-212ENST00000527887 GIT1Q9Y2X7 761 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 KIF3AQ9Y496 699 aa15.76■□□□□ 0.11
CAPN1-212ENST00000527887 FAM86C2PA6NEL3 165 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 POTEMA6NI47 508 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 MEIS3P2A8K0S8 358 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 GLRA2P23416 452 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 MBTD1Q05BQ5 628 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 CAPSQ13938 189 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 LONRF3Q496Y0 759 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 HAUS3Q68CZ6 603 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 CES5AQ6NT32 575 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 SYCE2Q6PIF2 218 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 KIF2CQ99661 725 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 DZANK1Q9NVP4 752 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 SSX2IPQ9Y2D8 614 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 FAN1Q9Y2M0 1017 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 HCFC2Q9Y5Z7 792 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 ZMYM2Q9UBW7 1377 aa15.75■□□□□ 0.11
CAPN1-212ENST00000527887 PLXNA4Q9HCM2 1894 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 CLASP2O75122 1294 aaKnown RBP15.74■□□□□ 0.11
CAPN1-212ENST00000527887 NR1I2O75469 434 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 U2AF2P26368 475 aaKnown RBP eCLIP15.74■□□□□ 0.11
CAPN1-212ENST00000527887 SLC11A1P49279 550 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 PDIA5Q14554 519 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 ZNF174Q15697 407 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 AMHR2Q16671 573 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 TTC38Q5R3I4 469 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 SMG8Q8ND04 991 aaKnown RBP15.74■□□□□ 0.11
CAPN1-212ENST00000527887 ASAP3Q8TDY4 903 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms