RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 FAM193BQ96PV7 902 aaPredicted RBP18.04■□□□□ 0.48
PTPRU-210ENST00000527027 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 RSAD1Q9HA92 442 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 FAN1Q9Y2M0 1017 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 PRR23AA6NEV1 266 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 EML1O00423 815 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 DKC1O60832 514 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 DEXIO95424 95 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 SSBP05455 408 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 SRGAP2CP0DJJ0 459 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 QARSP47897 775 aaKnown RBP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 AFF1P51825 1210 aaKnown RBP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 NPEPPSP55786 919 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 GALNT17Q6IS24 598 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 C15orf39Q6ZRI6 1047 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 SRGAP1Q7Z6B7 1085 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 DAGLBQ8NCG7 672 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 FLCNQ8NFG4 579 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 MRPL17Q9NRX2 175 aaKnown RBP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 DDX25Q9UHL0 483 aaKnown RBP18.03■□□□□ 0.48
PTPRU-210ENST00000527027 PPME1Q9Y570 386 aa18.03■□□□□ 0.48
PTPRU-210ENST00000527027 CNTNAP2Q9UHC6 1331 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 NRP1O14786 923 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 DMDP11532 3685 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 HOXA11P31270 313 aaPredicted RBP18.02■□□□□ 0.48
PTPRU-210ENST00000527027 NONOQ15233 471 aaKnown RBP eCLIP18.02■□□□□ 0.48
PTPRU-210ENST00000527027 NPY5RQ15761 445 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 LETM2Q2VYF4 491 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 UBXN11Q5T124 520 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 ZNF579Q8NAF0 562 aaKnown RBP18.02■□□□□ 0.48
PTPRU-210ENST00000527027 PSPC1Q8WXF1 523 aaKnown RBP18.02■□□□□ 0.48
PTPRU-210ENST00000527027 CEP170P1Q96L14 293 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 MINDY3Q9H8M7 445 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 KCNK12Q9HB15 430 aa18.02■□□□□ 0.48
PTPRU-210ENST00000527027 FAM186AA6NE01 2351 aa18.02■□□□□ 0.47
PTPRU-210ENST00000527027 CPLX1O14810 134 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 PI15O43692 258 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 POMCP01189 267 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 SOD2P04179 222 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 P4HBP07237 508 aaKnown RBP18.01■□□□□ 0.47
PTPRU-210ENST00000527027 NPR3P17342 541 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 AOC1P19801 751 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 RFC5P40937 340 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 FOXK2Q01167 660 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 LAMTOR4Q0VGL1 99 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 PPP2R5CQ13362 524 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 TOB2Q14106 344 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-210ENST00000527027 INF2Q27J81 1249 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 CWF19L1Q69YN2 538 aaKnown RBP18.01■□□□□ 0.47
PTPRU-210ENST00000527027 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 FRMD5Q7Z6J6 570 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 CNNM3Q8NE01 707 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 TMEM143Q96AN5 459 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 FAM20AQ96MK3 541 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-210ENST00000527027 DHX33Q9H6R0 707 aaKnown RBP18.01■□□□□ 0.47
PTPRU-210ENST00000527027 UBN1Q9NPG3 1134 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 IGSF9Q9P2J2 1179 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 DUSP12Q9UNI6 340 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 SSX2IPQ9Y2D8 614 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 PLXNA3P51805 1871 aa18.01■□□□□ 0.47
PTPRU-210ENST00000527027 C2CD2LO14523 706 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 ASAP2O43150 1006 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 SLC37A4O43826 429 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
PTPRU-210ENST00000527027 CYP26C1Q6V0L0 522 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 CMASQ8NFW8 434 aaPredicted RBP18■□□□□ 0.47
PTPRU-210ENST00000527027 NKD2Q969F2 451 aaPredicted RBP18■□□□□ 0.47
PTPRU-210ENST00000527027 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
PTPRU-210ENST00000527027 RPS6KC1Q96S38 1066 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 RTP3Q9BQQ7 232 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 ZSWIM6Q9HCJ5 1215 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 DPP7Q9UHL4 492 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 FBXL21Q9UKT6 434 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 VAV3Q9UKW4 847 aa18■□□□□ 0.47
PTPRU-210ENST00000527027 REC8O95072 547 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 URODP06132 367 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 ADH1AP07327 375 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 ITGA4P13612 1032 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 AK2P54819 239 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 PPP4R3AQ6IN85 833 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 CPLX2Q6PUV4 134 aaKnown RBP17.99■□□□□ 0.47
PTPRU-210ENST00000527027 OTUD6AQ7L8S5 288 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 TAS1R1Q7RTX1 841 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 CCDC105Q8IYK2 499 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 SMG8Q8ND04 991 aaKnown RBP17.99■□□□□ 0.47
PTPRU-210ENST00000527027 AIFM3Q96NN9 605 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 KCNMB3Q9NPA1 279 aa17.99■□□□□ 0.47
PTPRU-210ENST00000527027 WRAP73Q9P2S5 460 aaPredicted RBP17.99■□□□□ 0.47
PTPRU-210ENST00000527027 CCDC195A0A1B0GUA6 201 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 TEX28O15482 410 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 GAS2O43903 313 aaKnown RBP17.98■□□□□ 0.47
PTPRU-210ENST00000527027 OR1G1P47890 313 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 EPHA7Q15375 998 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 KIAA0319Q5VV43 1072 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 ELMSAN1Q6PJG2 1045 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 C4orf19Q8IY42 314 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 COLGALT2Q8IYK4 626 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms