RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SRGAP1Q7Z6B7 1085 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 CABP7Q86V35 215 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 TMEM105Q8N8V8 129 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 ZNF579Q8NAF0 562 aaKnown RBP20.98■□□□□ 0.95
CAPN1-206ENST00000526966 URGCPQ8TCY9 931 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 ATOH1Q92858 354 aaPredicted RBP20.98■□□□□ 0.95
CAPN1-206ENST00000526966 FAM20AQ96MK3 541 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 GBP3Q9H0R5 595 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 MINDY3Q9H8M7 445 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 SFXN1Q9H9B4 322 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 CNTNAP2Q9UHC6 1331 aa20.98■□□□□ 0.95
CAPN1-206ENST00000526966 H0Y858 1186 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 DDHD2O94830 711 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 HOXA11P31270 313 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-206ENST00000526966 AFF1P51825 1210 aaKnown RBP20.97■□□□□ 0.95
CAPN1-206ENST00000526966 LETM2Q2VYF4 491 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 UBXN11Q5T124 520 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 PPP4R3AQ6IN85 833 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 TMC5Q6UXY8 1006 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 GPR149Q86SP6 731 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 EXOC8Q8IYI6 725 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 KLHL5Q96PQ7 755 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 TMEM175Q9BSA9 504 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 PHF20Q9BVI0 1012 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 TM6SF1Q9BZW5 370 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 RSAD1Q9HA92 442 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 LIMD1Q9UGP4 676 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 CYP46A1Q9Y6A2 500 aa20.97■□□□□ 0.95
CAPN1-206ENST00000526966 DMDP11532 3685 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 PROB1E7EW31 1015 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 LILRB3O75022 631 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 P4HBP07237 508 aaKnown RBP20.96■□□□□ 0.95
CAPN1-206ENST00000526966 GCFC2P16383 781 aaKnown RBP20.96■□□□□ 0.95
CAPN1-206ENST00000526966 RFC5P40937 340 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 CLCN4P51793 760 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 CPLX2Q6PUV4 134 aaKnown RBP20.96■□□□□ 0.95
CAPN1-206ENST00000526966 PRPF31Q8WWY3 499 aaKnown RBP20.96■□□□□ 0.95
CAPN1-206ENST00000526966 PSPC1Q8WXF1 523 aaKnown RBP20.96■□□□□ 0.95
CAPN1-206ENST00000526966 CEP170P1Q96L14 293 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 EMILIN2Q9BXX0 1053 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 KANSL3Q9P2N6 904 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 KCNJ14Q9UNX9 436 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 DOCK8Q8NF50 2099 aa20.96■□□□□ 0.95
CAPN1-206ENST00000526966 MTCL1Q9Y4B5 1905 aaKnown RBP20.96■□□□□ 0.95
CAPN1-206ENST00000526966 TBX3O15119 743 aa20.95■□□□□ 0.94
CAPN1-206ENST00000526966 GAS2O43903 313 aaKnown RBP20.95■□□□□ 0.94
CAPN1-206ENST00000526966 CNPP09543 421 aaKnown RBP20.95■□□□□ 0.94
CAPN1-206ENST00000526966 LAMTOR4Q0VGL1 99 aa20.95■□□□□ 0.94
CAPN1-206ENST00000526966 NEK8Q86SG6 692 aa20.95■□□□□ 0.94
CAPN1-206ENST00000526966 C4orf19Q8IY42 314 aa20.95■□□□□ 0.94
CAPN1-206ENST00000526966 HAS1Q92839 578 aa20.95■□□□□ 0.94
CAPN1-206ENST00000526966 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
CAPN1-206ENST00000526966 LARP6Q9BRS8 491 aaKnown RBP20.95■□□□□ 0.94
CAPN1-206ENST00000526966 CCDC194A0A1B0GVG4 234 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 NCLP19338 710 aaKnown RBP20.94■□□□□ 0.94
CAPN1-206ENST00000526966 STK3Q13188 491 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 EPHA7Q15375 998 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 ASTLQ6HA08 431 aaPredicted RBP20.94■□□□□ 0.94
CAPN1-206ENST00000526966 C15orf39Q6ZRI6 1047 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 CCDC149Q6ZUS6 474 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 LXNQ9BS40 222 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 FAN1Q9Y2M0 1017 aa20.94■□□□□ 0.94
CAPN1-206ENST00000526966 NRP1O14786 923 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 INPPL1O15357 1258 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 EFEMP2O95967 443 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 SOD2P04179 222 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 ALDH2P05091 517 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 SRGAP2CP0DJJ0 459 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 KLRC2P26717 231 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 YWHABP31946 246 aaKnown RBP20.93■□□□□ 0.94
CAPN1-206ENST00000526966 CLCN5P51795 746 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 SPIRE1Q08AE8 756 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 EMC2Q15006 297 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 OTOP3Q7RTS5 596 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 FERMT3Q86UX7 667 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 RNF168Q8IYW5 571 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-206ENST00000526966 SMG8Q8ND04 991 aaKnown RBP20.93■□□□□ 0.94
CAPN1-206ENST00000526966 CNNM3Q8NE01 707 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 TCP11Q8WWU5 503 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 ACSF2Q96CM8 615 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-206ENST00000526966 HERC2P3Q9BVR0 1158 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 SLKQ9H2G2 1235 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-206ENST00000526966 MRPL17Q9NRX2 175 aaKnown RBP20.93■□□□□ 0.94
CAPN1-206ENST00000526966 MARCH5Q9NX47 278 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 STK36Q9NRP7 1315 aa20.93■□□□□ 0.94
CAPN1-206ENST00000526966 ASAP2O43150 1006 aa20.92■□□□□ 0.94
CAPN1-206ENST00000526966 POMCP01189 267 aa20.92■□□□□ 0.94
CAPN1-206ENST00000526966 SSBP05455 408 aaKnown RBP eCLIP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 NBL1P41271 181 aa20.92■□□□□ 0.94
CAPN1-206ENST00000526966 PCBP1Q15365 356 aaKnown RBP eCLIP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 CWF19L1Q69YN2 538 aaKnown RBP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 RNF149Q8NC42 400 aa20.92■□□□□ 0.94
CAPN1-206ENST00000526966 CMASQ8NFW8 434 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 FAM193BQ96PV7 902 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 NAP1L4Q99733 375 aaKnown RBP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 UBN1Q9NPG3 1134 aa20.92■□□□□ 0.94
CAPN1-206ENST00000526966 BMP2KQ9NSY1 1161 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-206ENST00000526966 GVINP1Q7Z2Y8 2422 aa20.92■□□□□ 0.94
CAPN1-206ENST00000526966 CCNT1O60563 726 aaKnown RBP20.91■□□□□ 0.94
CAPN1-206ENST00000526966 SCRN1Q12765 414 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms