RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ZC2HC1CQ53FD0 456 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-205ENST00000526954 COBLL1Q53SF7 1204 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 PLEKHG4Q58EX7 1191 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 ZNF507Q8TCN5 953 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 VWCEQ96DN2 955 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 PADI3Q9ULW8 664 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 ST3GAL5Q9UNP4 418 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 UBE4BO95155 1302 aa18.17■□□□□ 0.5
CAPN1-205ENST00000526954 TSPAN1O60635 241 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 PFKMP08237 780 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 AXLP30530 894 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 CD52P31358 61 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 BMT2Q1RMZ1 405 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
CAPN1-205ENST00000526954 CATSPER4Q7RTX7 472 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 MAP4K3Q8IVH8 894 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 RPUSD2Q8IZ73 545 aaKnown RBP18.16■□□□□ 0.5
CAPN1-205ENST00000526954 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 SCFD1Q8WVM8 642 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 APBB2Q92870 758 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 BADQ92934 168 aa18.16■□□□□ 0.5
CAPN1-205ENST00000526954 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
CAPN1-205ENST00000526954 ERLIN2O94905 339 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 PRPF6O94906 941 aaKnown RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 PIGRP01833 764 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 EDN1P05305 212 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 CSF2RAP15509 400 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 SYN1P17600 705 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 BMP6P22004 513 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 FGFR4P22455 802 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 HOXA11P31270 313 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 NFX1Q12986 1120 aaKnown RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 PRPF4BQ13523 1007 aaKnown RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 SEPT8Q92599 483 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 ACCSQ96QU6 501 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 MRPL4Q9BYD3 311 aaKnown RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 CHST12Q9NRB3 414 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 AGPAT5Q9NUQ2 364 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 ZMYND8Q9ULU4 1186 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-205ENST00000526954 EXOC7Q9UPT5 735 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 GDAQ9Y2T3 454 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 CNTNAP2Q9UHC6 1331 aa18.15■□□□□ 0.5
CAPN1-205ENST00000526954 BIN1O00499 593 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 KIF20AO95235 890 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 ARF4P18085 180 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-205ENST00000526954 HOXD13P35453 343 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 NCBP1Q09161 790 aaKnown RBP18.14■□□□□ 0.49
CAPN1-205ENST00000526954 KCNA1Q09470 495 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 PPIGQ13427 754 aaKnown RBP eCLIP18.14■□□□□ 0.491e-6■■■□□ 16.5
CAPN1-205ENST00000526954 ZPBP2Q6X784 338 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 MYOCDQ8IZQ8 938 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 GUF1Q8N442 669 aaKnown RBP18.14■□□□□ 0.49
CAPN1-205ENST00000526954 DBF4BQ8NFT6 615 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 ACO2Q99798 780 aaKnown RBP18.14■□□□□ 0.49
CAPN1-205ENST00000526954 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 TMX1Q9H3N1 280 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 TMEM206Q9H813 350 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
CAPN1-205ENST00000526954 A0A1B0GUA9 196 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 TTLL13PA6NNM8 815 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 B4GALT5O43286 388 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 PPP1R2P41236 205 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 FPGSQ05932 587 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 DSC3Q14574 896 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 ISM2Q6H9L7 571 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 CNKSR3Q6P9H4 555 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 DEFB128Q7Z7B8 93 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-205ENST00000526954 TNFSF13BQ9Y275 285 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 MICAL3Q7RTP6 2002 aa18.13■□□□□ 0.49
CAPN1-205ENST00000526954 CAPN15O75808 1086 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 PROZP22891 400 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 PRCPP42785 496 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 NLRP12P59046 1061 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 SNRPFP62306 86 aaKnown RBP18.12■□□□□ 0.49
CAPN1-205ENST00000526954 KNOP1Q1ED39 458 aaKnown RBP18.12■□□□□ 0.49
CAPN1-205ENST00000526954 ATF7IP2Q5U623 682 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 NOTUMQ6P988 496 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 SMYD4Q8IYR2 804 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-205ENST00000526954 ADSSL1Q8N142 457 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 CCDC51Q96ER9 411 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 TARS2Q9BW92 718 aaKnown RBP18.12■□□□□ 0.49
CAPN1-205ENST00000526954 TRAIPQ9BWF2 469 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 PTPRHQ9HD43 1115 aa18.12■□□□□ 0.49
CAPN1-205ENST00000526954 PIN4Q9Y237 131 aaKnown RBP18.12■□□□□ 0.49
CAPN1-205ENST00000526954 N4BP3O15049 544 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 TOM1L1O75674 476 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 ZSCAN20P17040 1043 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-205ENST00000526954 TCTN1Q2MV58 587 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 C16orf59Q7L2K0 433 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 NELFCDQ8IXH7 590 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 SYCP3Q8IZU3 236 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 MLKLQ8NB16 471 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 BICD1Q96G01 975 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 CPB2Q96IY4 423 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 GBP3Q9H0R5 595 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 TSPYL2Q9H2G4 693 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-205ENST00000526954 KCTD10Q9H3F6 313 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 PDZD7Q9H5P4 517 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms