RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 H0Y858 1186 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 ST18O60284 1047 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 B4GALT3O60512 393 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 MAFO75444 373 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-204ENST00000526468 STBD1O95210 358 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 ATAT1Q5SQI0 421 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
CAPN1-204ENST00000526468 B3GNT9Q6UX72 402 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 TMC5Q6UXY8 1006 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 CCDC149Q6ZUS6 474 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 ANO5Q75V66 913 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 PGBD4Q96DM1 585 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 LXNQ9BS40 222 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 VN1R3Q9BXE9 311 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-204ENST00000526468 RSAD1Q9HA92 442 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 CYP26B1Q9NR63 512 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
CAPN1-204ENST00000526468 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 CCDC194A0A1B0GVG4 234 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 EML1O00423 815 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 GALTP07902 379 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 CYP3A7P24462 503 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 NPEPPSP55786 919 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 EVCP57679 992 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 EMC2Q15006 297 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 FEZF2Q8TBJ5 459 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 CEP170P1Q96L14 293 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 MBOAT7Q96N66 472 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 FAM193BQ96PV7 902 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 EMILIN2Q9BXX0 1053 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 VAV3Q9UKW4 847 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-204ENST00000526468 IRAK3Q9Y616 596 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 CNTNAP2Q9UHC6 1331 aa13.11□□□□□ -0.31
CAPN1-204ENST00000526468 DMDP11532 3685 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 M0R2N6 131 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 DKC1O60832 514 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN1-204ENST00000526468 OFD1O75665 1012 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 ERLIN2O94905 339 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 URODP06132 367 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
CAPN1-204ENST00000526468 RFC5P40937 340 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 NUBP1P53384 320 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 TERF1P54274 439 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 PPP2R5CQ13362 524 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 NPY5RQ15761 445 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 NCAPH2Q6IBW4 605 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 GALNT17Q6IS24 598 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 NEK8Q86SG6 692 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 ZNF280BQ86YH2 543 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 ZDHHC14Q8IZN3 488 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 TMEM143Q96AN5 459 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-204ENST00000526468 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
CAPN1-204ENST00000526468 IFT122Q9HBG6 1241 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 LIMD1Q9UGP4 676 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
CAPN1-204ENST00000526468 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-204ENST00000526468 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 C2CD2LO14523 706 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 MARCH6O60337 910 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 ZNF623O75123 536 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 CDKL5O76039 1030 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 POMCP01189 267 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 GCFC2P16383 781 aaKnown RBP13.09□□□□□ -0.31
CAPN1-204ENST00000526468 KLRC2P26717 231 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 AGMOQ6ZNB7 445 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 SRGAP1Q7Z6B7 1085 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-204ENST00000526468 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 FLCNQ8NFG4 579 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
CAPN1-204ENST00000526468 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 MINDY3Q9H8M7 445 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 KCNMB3Q9NPA1 279 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 MRPL17Q9NRX2 175 aaKnown RBP13.09□□□□□ -0.31
CAPN1-204ENST00000526468 WRAP73Q9P2S5 460 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-204ENST00000526468 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
CAPN1-204ENST00000526468 STK36Q9NRP7 1315 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms