RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 POU3F3P20264 500 aaPredicted RBP17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 NPTX2P47972 431 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 EFNA5P52803 228 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 MAPK6Q16659 721 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 FAM187BQ17R55 369 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 LONRF3Q496Y0 759 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 CLLU1OSQ5K130 101 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 RRAGBQ5VZM2 374 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 MRPL10Q7Z7H8 261 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 GPBP1Q86WP2 473 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 ABI1Q8IZP0 508 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 LPPQ93052 612 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 PGBD4Q96DM1 585 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 CCDC51Q96ER9 411 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 KIFC3Q9BVG8 833 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 C17orf75Q9HAS0 396 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 TYW1Q9NV66 732 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 RCOR1Q9UKL0 485 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 RWDD3Q9Y3V2 267 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 A0A1B0GUA9 196 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 ACKR2O00590 384 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 CUTAO60888 179 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 PRKCBP05771 671 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 LIG1P18858 919 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 CTNNB1P35222 781 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 GPM6BQ13491 265 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 HELQQ8TDG4 1101 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 GDPD5Q8WTR4 605 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 PRIMPOLQ96LW4 560 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 CCDC113Q9H0I3 377 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 KMT5AQ9NQR1 393 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 KCNG1Q9UIX4 513 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 MTCH2Q9Y6C9 303 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 RALGAPA2Q2PPJ7 1873 aa17.9■□□□□ 0.46
SSSCA1-202ENST00000526433 TTLL13PA6NNM8 815 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 MEIS3P2A8K0S8 358 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 H3BNC9 293 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 K7ERI5 159 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 GTPBP6O43824 516 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 DMP1Q13316 513 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 PRPF4BQ13523 1007 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 NAALADL2Q58DX5 795 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 AXDND1Q5T1B0 1012 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 SPOUT1Q5T280 376 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 CCDC73Q6ZRK6 1079 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 LRRC55Q6ZSA7 311 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 SMG8Q8ND04 991 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 CNNM3Q8NE01 707 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 MAFAQ8NHW3 353 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 KCNG4Q8TDN1 519 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 NTPCRQ9BSD7 190 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 STK17AQ9UEE5 414 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 USP20Q9Y2K6 914 aa17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 RBM19Q9Y4C8 960 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-202ENST00000526433 TCHHQ07283 1943 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 A0A087X0B3 334 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 C5orf67F2Z3F1 127 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 SLC16A4O15374 487 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 OFD1O75665 1012 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 KRT18P05783 430 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 PLS3P13797 630 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 NCLP19338 710 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 ME1P48163 572 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 GIT2Q14161 759 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 TMEM132AQ24JP5 1023 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 AGMOQ6ZNB7 445 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 SV2BQ7L1I2 683 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 SPIRE2Q8WWL2 714 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 REEP2Q9BRK0 252 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 PLVAPQ9BX97 442 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 TMEM134Q9H6X4 195 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 CWH43Q9H720 699 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 LMCD1Q9NZU5 365 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 HCSTQ9UBK5 93 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 ODF2LQ9ULJ1 636 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 PCDHA7Q9UN72 937 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 IPPQ9Y573 584 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 MYO7AQ13402 2215 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 COL6A3P12111 3177 aa17.88■□□□□ 0.45
SSSCA1-202ENST00000526433 KIAA1671Q9BY89 1806 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 NPTXRO95502 500 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 EDN1P05305 212 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 ITGA4P13612 1032 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 SMTNP53814 917 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 CCDC85BQ15834 202 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 NT5DC1Q5TFE4 455 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 SLC27A1Q6PCB7 646 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 SHC4Q6S5L8 630 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 GLB1LQ6UWU2 654 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 PDILTQ8N807 584 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 PPM1EQ8WY54 764 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 C11orf84Q9BUA3 381 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 TRIM6Q9C030 488 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms