RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 L2HGDHQ9H9P8 463 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 RRP7AQ9Y3A4 280 aaKnown RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 B3GALT1Q9Y5Z6 326 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 OTOL1A6NHN0 477 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 HTATSF1O43719 755 aaKnown RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 FBXO21O94952 628 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 CHGBP05060 677 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 HSP90AB1P08238 724 aaKnown RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 ZBTB48P10074 688 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 ZNF28P17035 718 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 GLRBP48167 497 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 MLLT6P55198 1093 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 IRF9Q00978 393 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 LMOD3Q0VAK6 560 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 ZXDCQ2QGD7 858 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 DALRD3Q5D0E6 543 aaKnown RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 C1orf141Q5JVX7 400 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 FAM26FQ5R3K3 315 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 MCTP2Q6DN12 878 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 ZNF530Q6P9A1 599 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 LRRTM3Q86VH5 581 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 ZNF761Q86XN6 746 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 SYT8Q8NBV8 401 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 DDX1Q92499 740 aaKnown RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 DLG3Q92796 817 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 SLC39A2Q9NP94 309 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 RGS17Q9UGC6 210 aaPredicted RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 NCAPD2Q15021 1401 aa5.7□□□□□ -1.5
USP48-211ENST00000526044 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.7□□□□□ -1.5
USP48-211ENST00000526044 ATRNO75882 1429 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 PTPDC1A2A3K4 754 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 CBX4O00257 560 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 TRAF5O00463 557 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 PHKG2P15735 406 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 POU3F2P20265 443 aaPredicted RBP5.69□□□□□ -1.5
USP48-211ENST00000526044 AOAHP28039 575 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 NEK4P51957 841 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 GJA9P57773 515 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 TMEM132BQ14DG7 1078 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 SMAD2Q15796 467 aaKnown RBP5.69□□□□□ -1.5
USP48-211ENST00000526044 TAF7LQ5H9L4 462 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 PHF19Q5T6S3 580 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 NT5DC1Q5TFE4 455 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 SDE2Q6IQ49 451 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 CNNM4Q6P4Q7 775 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 TRMT10BQ6PF06 316 aaKnown RBP5.69□□□□□ -1.5
USP48-211ENST00000526044 WDR63Q8IWG1 891 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 TXNDC5Q8NBS9 432 aaKnown RBP5.69□□□□□ -1.5
USP48-211ENST00000526044 IL17REQ8NFR9 667 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 FEZF2Q8TBJ5 459 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 B4GALT6Q9UBX8 382 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 FTSJ1Q9UET6 329 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 ZFP69BQ9UJL9 534 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 DLG5Q8TDM6 1919 aa5.69□□□□□ -1.5
USP48-211ENST00000526044 PLEKHG2Q9H7P9 1386 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 PARP4Q9UKK3 1724 aaKnown RBP5.68□□□□□ -1.5
USP48-211ENST00000526044 C9orf118A6NHY6 69 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 FOXP2O15409 715 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 CYP27B1O15528 508 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 NOBOXO60393 691 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 KRT37O76014 449 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 CYP1A1P04798 512 aaPredicted RBP5.68□□□□□ -1.5
USP48-211ENST00000526044 PTGS1P23219 599 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 HSD3B2P26439 372 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 SDHAP31040 664 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 NFKB2Q00653 900 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 CALD1Q05682 793 aaKnown RBP5.68□□□□□ -1.5
USP48-211ENST00000526044 KIAA2012Q0VF49 1180 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 DCTN1Q14203 1278 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 SPATS1Q496A3 300 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 FSTL4Q6MZW2 842 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
USP48-211ENST00000526044 DPP8Q6V1X1 898 aaPredicted RBP5.68□□□□□ -1.5
USP48-211ENST00000526044 MCM10Q7L590 875 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 FAM124AQ86V42 546 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 KIF18BQ86Y91 864 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 ZDHHC14Q8IZN3 488 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 AHI1Q8N157 1196 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 STPG3Q8N7X2 389 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 LCORQ96JN0 433 aaPredicted RBP5.68□□□□□ -1.5
USP48-211ENST00000526044 ORAI3Q9BRQ5 295 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 TMEM168Q9H0V1 697 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 KCND1Q9NSA2 647 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 USP40Q9NVE5 1235 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 GALNT8Q9NY28 637 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 BTBD7Q9P203 1132 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 KAT6BQ8WYB5 2073 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 PCDH11XQ9BZA7 1347 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 PCDH11YQ9BZA8 1340 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 MEGF6O75095 1541 aa5.68□□□□□ -1.5
USP48-211ENST00000526044 OVOS2A0A0G2JMS6 1433 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 DISP2A7MBM2 1401 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 MROH6A6NGR9 719 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 ERVV-2B6SEH9 535 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 H7C1D1 291 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 RNMTO43148 476 aaKnown RBP5.67□□□□□ -1.5
USP48-211ENST00000526044 CLSTN1O94985 981 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 IL18BPO95998 194 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms