RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 POLR3CQ9BUI4 534 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-209ENST00000525854 NFKBIZQ9BYH8 718 aa12.93□□□□□ -0.34
HIF3A-209ENST00000525854 UBN1Q9NPG3 1134 aa12.93□□□□□ -0.34
HIF3A-209ENST00000525854 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
HIF3A-209ENST00000525854 KANSL3Q9P2N6 904 aa12.93□□□□□ -0.34
HIF3A-209ENST00000525854 DBR1Q9UK59 544 aaKnown RBP12.93□□□□□ -0.34
HIF3A-209ENST00000525854 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 TSPAN1O60635 241 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 GLP2RO95838 553 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 RPA1P27694 616 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 CAPSQ13938 189 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 HAUS3Q68CZ6 603 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 TMEM184AQ6ZMB5 413 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 CATSPER3Q86XQ3 398 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 MRPL43Q8N983 215 aaKnown RBP12.92□□□□□ -0.34
HIF3A-209ENST00000525854 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 FAM193BQ96PV7 902 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-209ENST00000525854 POLR3FQ9H1D9 316 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-209ENST00000525854 RSAD1Q9HA92 442 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 STK39Q9UEW8 545 aa12.92□□□□□ -0.34
HIF3A-209ENST00000525854 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-209ENST00000525854 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 HIDE1A8MVS5 230 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 NT5C1B-RDH14C9J2C7 533 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 GPR37L1O60883 481 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 GALTP07902 379 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 HOXB8P17481 243 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 MUTP22033 750 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 GLRA2P23416 452 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 GIT2Q14161 759 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 UBXN11Q5T124 520 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 AGMOQ6ZNB7 445 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 DDX53Q86TM3 631 aaKnown RBP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 IGSF21Q96ID5 467 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 NRDE2Q9H7Z3 1164 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 USP15Q9Y4E8 981 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-209ENST00000525854 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 ATG2AQ2TAZ0 1938 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
HIF3A-209ENST00000525854 A0A087WWV3 80 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 C2orf71A6NGG8 1288 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 DCXO43602 365 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 MED24O75448 989 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 CXCL14O95715 111 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 ALDH2P05091 517 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 ITGA4P13612 1032 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 CA8P35219 290 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
HIF3A-209ENST00000525854 KCNC3Q14003 757 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 VPS52Q8N1B4 723 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 VN1R2Q8NFZ6 395 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 CASP10Q92851 521 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 LRFN3Q9BTN0 628 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 IPPQ9Y573 584 aa12.9□□□□□ -0.34
HIF3A-209ENST00000525854 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 LAD1O00515 517 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 CTSAP10619 480 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 ARF4P18085 180 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-209ENST00000525854 CYP11B2P19099 503 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 SLC11A1P49279 550 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 MCM2P49736 904 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 RBM10P98175 930 aaKnown RBP12.89□□□□□ -0.35
HIF3A-209ENST00000525854 PDIA5Q14554 519 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 ANKRD54Q6NXT1 300 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 MAEAQ7L5Y9 396 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 ZBTB8OSQ8IWT0 167 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 SMG8Q8ND04 991 aaKnown RBP12.89□□□□□ -0.35
HIF3A-209ENST00000525854 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 PRIMPOLQ96LW4 560 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 EIF2AQ9BY44 585 aaKnown RBP12.89□□□□□ -0.35
HIF3A-209ENST00000525854 ZBP1Q9H171 429 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 C2orf40Q9H1Z8 148 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 GPRC5CQ9NQ84 441 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 DNAJB4Q9UDY4 337 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 LRWD1Q9UFC0 647 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 IRAK3Q9Y616 596 aa12.89□□□□□ -0.35
HIF3A-209ENST00000525854 A0A1B0GUA9 196 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 INPPL1O15357 1258 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms