RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 HHIPL2Q6UWX4 724 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 BBS5Q8N3I7 341 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 HIPK4Q8NE63 616 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 MRPL4Q9BYD3 311 aaKnown RBP8.88□□□□□ -0.99
CHD7-203ENST00000525508 VCX3BQ9H321 246 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 SUCLA2Q9P2R7 463 aaPredicted RBP8.88□□□□□ -0.99
CHD7-203ENST00000525508 FAM8A1Q9UBU6 413 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 INTUQ9ULD6 942 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 PLAAQ9Y263 795 aa8.88□□□□□ -0.99
CHD7-203ENST00000525508 RRP15Q9Y3B9 282 aaKnown RBP8.88□□□□□ -0.99
CHD7-203ENST00000525508 IQSEC2Q5JU85 1478 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 CROCC2H7BZ55 1655 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 UNC13BO14795 1591 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 CEP170BQ9Y4F5 1589 aaPredicted RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 RSPH10B2B2RC85 870 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 ATMINO43313 823 aaPredicted RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 CSDE1O75534 798 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 RSPH10BP0C881 870 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 ARHGEF6Q15052 776 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 SURF1Q15526 300 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 DUOXA2Q1HG44 320 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 HABP4Q5JVS0 413 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 DHX35Q9H5Z1 703 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 KCNQ5Q9NR82 932 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 NYAP2Q9P242 653 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 AGAP1Q9UPQ3 857 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 NEXMIFQ5QGS0 1516 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 RFX7Q2KHR2 1363 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 PLEKHG2Q9H7P9 1386 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 LAMC1P11047 1609 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 SUN1O94901 812 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 LCP1P13796 627 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 SDC4P31431 198 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 SERPINB6P35237 376 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 ERFP50548 548 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 ZNF157P51786 506 aaPredicted RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 IL1RL1Q01638 556 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 THOC5Q13769 683 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 E4F1Q66K89 784 aaPredicted RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 C1orf228Q6PIY5 440 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 TRIM59Q8IWR1 403 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 RNF10Q8N5U6 811 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 ATXN7L3BQ96GX2 97 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 TARS2Q9BW92 718 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 KCNF1Q9H3M0 494 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 KCNH7Q9NS40 1196 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 CLTCQ00610 1675 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 RPSAP08865 295 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 PLS3P13797 630 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 PMLP29590 882 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 RASSF2P50749 326 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 DPYDQ12882 1025 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 PDIA5Q14554 519 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 ALDH8A1Q9H2A2 487 aaPredicted RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 HSPBP1Q9NZL4 362 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 ANGPTL3Q9Y5C1 460 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 FHOD1Q9Y613 1164 aa8.87□□□□□ -0.99
CHD7-203ENST00000525508 PPRC1Q5VV67 1664 aaKnown RBP8.87□□□□□ -0.99
CHD7-203ENST00000525508 CFLARO15519 480 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 PRKCBP05771 671 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 WEE2P0C1S8 567 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 SCP2P22307 547 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 GBP1P32455 592 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 GARSP41250 739 aaKnown RBP8.86□□□□□ -0.99
CHD7-203ENST00000525508 HUNKP57058 714 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 LRRC14Q15048 493 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 GPD1LQ8N335 351 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 CCDC197Q8NCU1 140 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 AFG1LQ8WV93 481 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 ELAC2Q9BQ52 826 aaKnown RBP8.86□□□□□ -0.99
CHD7-203ENST00000525508 IFT122Q9HBG6 1241 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 SUGT1Q9Y2Z0 365 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 SCINQ9Y6U3 715 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 FRMD3A2A2Y4 597 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 TJP3O95049 919 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 PGK2P07205 417 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 RAD9BQ6WBX8 426 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 LRRC43Q8N309 656 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 OR6J1Q8NGC5 347 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 MAML1Q92585 1016 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 FAM49BQ9NUQ9 324 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 RNF14Q9UBS8 474 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 WDR46O15213 610 aaKnown RBP8.86□□□□□ -0.99
CHD7-203ENST00000525508 SART1O43290 800 aaKnown RBP8.86□□□□□ -0.99
CHD7-203ENST00000525508 ENTPD3O75355 529 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 NCF2P19878 526 aaPredicted RBP8.86□□□□□ -0.99
CHD7-203ENST00000525508 GPS1Q13098 491 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 CATSPER3Q86XQ3 398 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 DNAAF5Q86Y56 855 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 PPM1NQ8N819 430 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 BEST2Q8NFU1 509 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 AGAP3Q96P47 875 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 SEL1LQ9UBV2 794 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 MEGF6O75095 1541 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 UCHL3P15374 230 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 GGCXP38435 758 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 CASP4P49662 377 aa8.86□□□□□ -0.99
CHD7-203ENST00000525508 CDH6P55285 790 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms