RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 ASAP3Q8TDY4 903 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 MRPS27Q92552 414 aaKnown RBP11.62□□□□□ -0.55
RBBP4-216ENST00000525506 MSLNLQ96KJ4 702 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 CCDC43Q96MW1 224 aaKnown RBP11.62□□□□□ -0.55
RBBP4-216ENST00000525506 NFKBIZQ9BYH8 718 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 ZSCAN16Q9H4T2 348 aaPredicted RBP11.62□□□□□ -0.55
RBBP4-216ENST00000525506 AGPAT5Q9NUQ2 364 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 SPG21Q9NZD8 308 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 CD207Q9UJ71 328 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 VPS37CA5D8V6 355 aaPredicted RBP11.61□□□□□ -0.55
RBBP4-216ENST00000525506 HIDE1A8MVS5 230 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 B4GALT3O60512 393 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 ZC3H11AO75152 810 aaKnown RBP eCLIP11.61□□□□□ -0.55
RBBP4-216ENST00000525506 MED24O75448 989 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 OFD1O75665 1012 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 HOXA11P31270 313 aaPredicted RBP11.61□□□□□ -0.55
RBBP4-216ENST00000525506 AFF1P51825 1210 aaKnown RBP11.61□□□□□ -0.55
RBBP4-216ENST00000525506 BCAR1P56945 870 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 PLCB3Q01970 1234 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 ZP2Q05996 745 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 CSPP1Q1MSJ5 1256 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 HYIQ5T013 277 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 UBXN11Q5T124 520 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 KRT79Q5XKE5 535 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 AGMOQ6ZNB7 445 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 MAEAQ7L5Y9 396 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 TMEM173Q86WV6 379 aaPredicted RBP11.61□□□□□ -0.55
RBBP4-216ENST00000525506 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
RBBP4-216ENST00000525506 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 PPP2R3CQ969Q6 453 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 TCF25Q9BQ70 676 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 GBP3Q9H0R5 595 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 NRDE2Q9H7Z3 1164 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 ENTPD7Q9NQZ7 604 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 TBC1D13Q9NVG8 400 aa11.61□□□□□ -0.55
RBBP4-216ENST00000525506 TRIP11Q15643 1979 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 STX6O43752 255 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 USO1O60763 962 aaKnown RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 ZNF623O75123 536 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 GLRA2P23416 452 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 ARL2P36404 184 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 CCT6AP40227 531 aaKnown RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 PTENP60484 403 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 KRT17Q04695 432 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 RESTQ13127 1097 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 SMAD4Q13485 552 aaKnown RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 CAPSQ13938 189 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 TFDP1Q14186 410 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 SMAD2Q15796 467 aaKnown RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 DUSP6Q16828 381 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 NOMO2Q5JPE7 1267 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 LLGL2Q6P1M3 1020 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 TMC7Q7Z402 723 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 SNX29Q8TEQ0 813 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 BCL7CQ8WUZ0 217 aaPredicted RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 APOL5Q9BWW9 433 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 NT5C3AQ9H0P0 336 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 C11orf16Q9NQ32 467 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 GPRC5CQ9NQ84 441 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
RBBP4-216ENST00000525506 MTMR6Q9Y217 621 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 FAM50BQ9Y247 325 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 LZTS1Q9Y250 596 aa11.6□□□□□ -0.55
RBBP4-216ENST00000525506 MYO10Q9HD67 2058 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 PI4K2BG5E9Z4 385 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 INO80B-WBP1J3KQ70 363 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 TSPAN1O60635 241 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 ERLIN2O94905 339 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 EYA4O95677 639 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 HSP90AA1P07900 732 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 SKIP12755 728 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 CA8P35219 290 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 PPM1AP35813 382 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 RAB27AP51159 221 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 IL17AQ16552 155 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 MRPL10Q7Z7H8 261 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 CDR2LQ86X02 465 aaPredicted RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 SMRP1Q8NCR6 262 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 SMG8Q8ND04 991 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 AUTS2Q8WXX7 1259 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 LRFN3Q9BTN0 628 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 MRPL9Q9BYD2 267 aaKnown RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 POLR3FQ9H1D9 316 aaPredicted RBP11.59□□□□□ -0.55
RBBP4-216ENST00000525506 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 POLD4Q9HCU8 107 aa11.59□□□□□ -0.55
RBBP4-216ENST00000525506 KCND2Q9NZV8 630 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms