RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 VCAM1P19320 739 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 MAOBP27338 520 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 SH3BGRP55822 239 aaPredicted RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 RHBDL3P58872 404 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 MECOMQ03112 1051 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 LMNB2Q03252 620 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 TCF15Q12870 199 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 KCTD2Q14681 263 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 BRD3Q15059 726 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 CCDC38Q502W7 563 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 FOCADQ5VW36 1801 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 HGSNATQ68CP4 663 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 FAM43BQ6ZT52 329 aaPredicted RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 MICALCLQ6ZW33 695 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 BMP8AQ7Z5Y6 402 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 DEFB128Q7Z7B8 93 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 TAX1BP1Q86VP1 789 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 ADHFE1Q8IWW8 467 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 MB21D1Q8N884 522 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 CEP112Q8N8E3 955 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 KLHDC9Q8NEP7 349 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 KLHDC4Q8TBB5 520 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 MIPOL1Q8TD10 442 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 GPT2Q8TD30 523 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 GDPD5Q8WTR4 605 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 TSR2Q969E8 191 aaKnown RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 SGSM3Q96HU1 749 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 ROBO3Q96MS0 1386 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 EIF3CQ99613 913 aaKnown RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 SEZ6LQ9BYH1 1024 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 FTOQ9C0B1 505 aaKnown RBP eCLIP5.61□□□□□ -1.51
CD44-218ENST00000525469 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 SRCIN1Q9C0H9 1055 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 BICC1Q9H694 974 aaKnown RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 C5orf42Q9H799 3197 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 TTC12Q9H892 705 aaPredicted RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 L2HGDHQ9H9P8 463 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 CABP5Q9NP86 173 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 ETAA1Q9NY74 926 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 IMPACTQ9P2X3 320 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 MYH8P13535 1937 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 UMODL1Q5DID0 1318 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 PHLPP2Q6ZVD8 1323 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 PNMA6FA0A0J9YX94 578 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 HMX2A2RU54 273 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 TMEM221A6NGB7 291 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 H3BQ06 376 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 M0R296 226 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 EYA2O00167 538 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 APAF1O14727 1248 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 CHUKO15111 745 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 ZEB2O60315 1214 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 PPFIA4O75335 1185 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 CABYRO75952 493 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 ERLIN2O94905 339 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 ZRANB2O95218 330 aaKnown RBP eCLIP5.6□□□□□ -1.51
CD44-218ENST00000525469 BAG3O95817 575 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 PGK2P07205 417 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 ZNF865P0CJ78 1059 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 ADH5P11766 374 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 RLBP1P12271 317 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 CST5P28325 142 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 MAGEA8P43361 318 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 PHKA1P46020 1223 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 MRPL12P52815 198 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 SLC8A3P57103 927 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 NUCB1Q02818 461 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 ZP2Q05996 745 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 SOX4Q06945 474 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 MAP7Q14244 749 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 GRM2Q14416 872 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 TTLL4Q14679 1199 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 SMC1AQ14683 1233 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 PTPROQ16827 1216 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 ZNF423Q2M1K9 1284 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 FILIP1LQ4L180 1135 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 HERC4Q5GLZ8 1057 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 CCSAPQ6IQ19 270 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 FBXO38Q6PIJ6 1188 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 SDCCAG8Q86SQ7 713 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 HERC6Q8IVU3 1022 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 DRC7Q8IY82 874 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 FBXL6Q8N531 539 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 CTCFLQ8NI51 663 aaPredicted RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 HNRNPLLQ8WVV9 542 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 EDAQ92838 391 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 SCLYQ96I15 445 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 NOC4LQ9BVI4 516 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 UBXN6Q9BZV1 441 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 SIL1Q9H173 461 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 MUTYHQ9UIF7 546 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 DIS3Q9Y2L1 958 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 FHOD1Q9Y613 1164 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 CACNA1HO95180 2353 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 TPRP12270 2363 aaKnown RBP5.6□□□□□ -1.51
CD44-218ENST00000525469 TET1Q8NFU7 2136 aa5.6□□□□□ -1.51
CD44-218ENST00000525469 TTC41PQ6P2S7 1318 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms