RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
CD44-217ENST00000525348 VPS11Q9H270 941 aa5.66□□□□□ -1.5
CD44-217ENST00000525348 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 GPR39O43194 453 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 BRINP1O60477 761 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 PRKD3O94806 890 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 C1SP09871 688 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 C6P13671 934 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 ENPP1P22413 925 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 CASRP41180 1078 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 SCNN1GP51170 649 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 UBE3CQ15386 1083 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 ELAVL1Q15717 326 aaKnown RBP5.65□□□□□ -1.5
CD44-217ENST00000525348 FKBP15Q5T1M5 1219 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 ABHD15Q6UXT9 468 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 ELOA2Q8IYF1 753 aaPredicted RBP5.65□□□□□ -1.5
CD44-217ENST00000525348 LILRA3Q8N6C8 439 aaPredicted RBP5.65□□□□□ -1.5
CD44-217ENST00000525348 OR14C36Q8NHC7 312 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 COG1Q8WTW3 980 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 TGFBRAP1Q8WUH2 860 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 LMBR1Q8WVP7 490 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 ZNF503Q96F45 646 aa5.65□□□□□ -1.5
CD44-217ENST00000525348 NRP2O60462 931 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 CLSTN1O94985 981 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 TACR2P21452 398 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 XPAP23025 273 aaPredicted RBP5.64□□□□□ -1.51
CD44-217ENST00000525348 CNGA1P29973 690 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 RABGGTBP53611 331 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 NPEPPSP55786 919 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 HHEXQ03014 270 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 FOXE3Q13461 319 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 RRP1BQ14684 758 aaKnown RBP5.64□□□□□ -1.51
CD44-217ENST00000525348 UGT8Q16880 541 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD44-217ENST00000525348 MIIPQ5JXC2 388 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 LMBR1LQ6UX01 489 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 C1orf210Q8IVY1 113 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 GLB1L2Q8IW92 636 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 TSPEARQ8WU66 669 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 RSAD2Q8WXG1 361 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 ZNF512Q96ME7 567 aaPredicted RBP5.64□□□□□ -1.51
CD44-217ENST00000525348 SCAND2PQ9GZW5 306 aaPredicted RBP5.64□□□□□ -1.51
CD44-217ENST00000525348 CEP72Q9P209 647 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 DPP7Q9UHL4 492 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 KCNG1Q9UIX4 513 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 GIT1Q9Y2X7 761 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 PRKAB1Q9Y478 270 aa5.64□□□□□ -1.51
CD44-217ENST00000525348 LTA4HP09960 611 aaKnown RBP5.63□□□□□ -1.51
CD44-217ENST00000525348 NRG3P56975 720 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 SCAND1P57086 179 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 IQSEC1Q6DN90 963 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 ANKRD35Q8N283 1001 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 MB21D1Q8N884 522 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 CACTINQ8WUQ7 758 aaKnown RBP5.63□□□□□ -1.51
CD44-217ENST00000525348 MIEF2Q96C03 454 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 ACAP3Q96P50 834 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 QRSL1Q9H0R6 528 aaKnown RBP5.63□□□□□ -1.51
CD44-217ENST00000525348 TMPRSS5Q9H3S3 457 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 C14orf119Q9NWQ9 140 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 CADPSQ9ULU8 1353 aa5.63□□□□□ -1.51
CD44-217ENST00000525348 KLRG2A4D1S0 409 aaPredicted RBP5.62□□□□□ -1.51
CD44-217ENST00000525348 GOLGA8AA7E2F4 631 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 CDK17Q00537 523 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 ZNF662Q6ZS27 426 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 KCNK18Q7Z418 384 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 MDGA1Q8NFP4 955 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 WDR66Q8TBY9 1149 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 ARL8AQ96BM9 186 aa5.62□□□□□ -1.51
CD44-217ENST00000525348 NRP1O14786 923 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 HOXA3O43365 443 aaPredicted RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 AKAP8O43823 692 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 PRAMEF4O60810 478 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 CTSSP25774 331 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 CANXP27824 592 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 GPR3P46089 330 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 PTTG1IPP53801 180 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 ERVK-21P61565 698 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 CCT2P78371 535 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 SLC25A3Q00325 362 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 PTH1RQ03431 593 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 MRPL49Q13405 166 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 HTR3DQ70Z44 454 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 DDX42Q86XP3 938 aaKnown RBP eCLIP5.61□□□□□ -1.51
CD44-217ENST00000525348 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 THEMISQ8N1K5 641 aaPredicted RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 OR5M3Q8NGP4 307 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 PGBD4Q96DM1 585 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 LSM14BQ9BX40 385 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 CPEB1Q9BZB8 566 aaKnown RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 ZNF703Q9H7S9 590 aaPredicted RBP5.61□□□□□ -1.51
CD44-217ENST00000525348 SBNO2Q9Y2G9 1366 aa5.61□□□□□ -1.51
CD44-217ENST00000525348 PHLDB1Q86UU1 1377 aa5.6□□□□□ -1.51
CD44-217ENST00000525348 TTBK1Q5TCY1 1321 aaPredicted RBP5.6□□□□□ -1.51
CD44-217ENST00000525348 NPIPB8E9PQR5 432 aa5.6□□□□□ -1.51
CD44-217ENST00000525348 CYP27B1O15528 508 aa5.6□□□□□ -1.51
CD44-217ENST00000525348 FSHBP01225 129 aa5.6□□□□□ -1.51
CD44-217ENST00000525348 WNT3AP56704 352 aa5.6□□□□□ -1.51
CD44-217ENST00000525348 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms