RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 NRIP1P48552 1158 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 KCNC3Q14003 757 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 SF3A1Q15459 793 aaKnown RBP12.71□□□□□ -0.37
CTTN-209ENST00000525276 PAN2Q504Q3 1202 aaKnown RBP12.71□□□□□ -0.37
CTTN-209ENST00000525276 KSR1Q8IVT5 923 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 FBXL6Q8N531 539 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.37
CTTN-209ENST00000525276 NLRP4Q96MN2 994 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 FDXACB1Q9BRP7 624 aaPredicted RBP12.71□□□□□ -0.37
CTTN-209ENST00000525276 INO80BQ9C086 356 aaPredicted RBP12.71□□□□□ -0.37
CTTN-209ENST00000525276 XPNPEP1Q9NQW7 623 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 C1orf112Q9NSG2 853 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
CTTN-209ENST00000525276 DENND3A2RUS2 1198 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 PP2D1A8MPX8 630 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
CTTN-209ENST00000525276 STAG3L1P0CL83 205 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTTN-209ENST00000525276 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 LAMTOR4Q0VGL1 99 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 MXD4Q14582 209 aaPredicted RBP12.7□□□□□ -0.38
CTTN-209ENST00000525276 NAALADL2Q58DX5 795 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 RBM23Q86U06 439 aaKnown RBP12.7□□□□□ -0.38
CTTN-209ENST00000525276 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 MCPH1Q8NEM0 835 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 AK8Q96MA6 479 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 ADAM2Q99965 735 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 PHF7Q9BWX1 381 aaPredicted RBP12.7□□□□□ -0.38
CTTN-209ENST00000525276 RGS18Q9NS28 235 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
CTTN-209ENST00000525276 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
CTTN-209ENST00000525276 KIAA1024Q9UPX6 916 aa12.7□□□□□ -0.38
CTTN-209ENST00000525276 MYO10Q9HD67 2058 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 PER2O15055 1255 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 MGEA5O60502 916 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 PDGFBP01127 241 aaPredicted RBP12.69□□□□□ -0.38
CTTN-209ENST00000525276 SRGAP2CP0DJJ0 459 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
CTTN-209ENST00000525276 CDC25AP30304 524 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 ARL2P36404 184 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 SARSP49591 514 aaKnown RBP12.69□□□□□ -0.38
CTTN-209ENST00000525276 TFDP1Q14186 410 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 DSC3Q14574 896 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 ECM1Q16610 540 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 FAM173BQ6P4H8 233 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 PADI6Q6TGC4 694 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 SLC24A5Q71RS6 500 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 SRGAP1Q7Z6B7 1085 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
CTTN-209ENST00000525276 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 DNM3Q9UQ16 869 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 CLIC4Q9Y696 253 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 ARID2Q68CP9 1835 aa12.69□□□□□ -0.38
CTTN-209ENST00000525276 FSCN2O14926 492 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 SLC26A4O43511 780 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 GFRA3O60609 400 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
CTTN-209ENST00000525276 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
CTTN-209ENST00000525276 CYP11B2P19099 503 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 FGFR4P22455 802 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 LONP1P36776 959 aaKnown RBP12.68□□□□□ -0.38
CTTN-209ENST00000525276 PHKA2P46019 1235 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 ERVFC1P60507 584 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 ZRSR1Q15695 479 aaKnown RBP12.68□□□□□ -0.38
CTTN-209ENST00000525276 CATSPER4Q7RTX7 472 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 KCTD17Q8N5Z5 321 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 RNF149Q8NC42 400 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 CDK5RAP3Q96JB5 506 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 RPGRIP1Q96KN7 1286 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 PRRX2Q99811 253 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 POLR3FQ9H1D9 316 aaPredicted RBP12.68□□□□□ -0.38
CTTN-209ENST00000525276 S1PR5Q9H228 398 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 BHMT2Q9H2M3 363 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 IFT122Q9HBG6 1241 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 CHST12Q9NRB3 414 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 ZFHX4Q86UP3 3567 aa12.68□□□□□ -0.38
CTTN-209ENST00000525276 C9IYK1 514 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
CTTN-209ENST00000525276 IBSPP21815 317 aaPredicted RBP12.67□□□□□ -0.38
CTTN-209ENST00000525276 GLRA2P23416 452 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 AVPR2P30518 371 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 UBA7P41226 1012 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 PTENP60484 403 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 FAM189BP81408 668 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
CTTN-209ENST00000525276 POU5F1BQ06416 359 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 CAPSQ13938 189 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 BECN1Q14457 450 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 PTPAQ15257 358 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 DUSP6Q16828 381 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 HYIQ5T013 277 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 FAM102BQ5T8I3 360 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 SYCE2Q6PIF2 218 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 MAEAQ7L5Y9 396 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 CABP7Q86V35 215 aa12.67□□□□□ -0.38
CTTN-209ENST00000525276 SUGP1Q8IWZ8 645 aaKnown RBP12.67□□□□□ -0.38
CTTN-209ENST00000525276 ASAP3Q8TDY4 903 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms