RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 PSPC1Q8WXF1 523 aaKnown RBP7.17□□□□□ -1.26
CD44-214ENST00000525211 SLC7A3Q8WY07 619 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 DPF3Q92784 378 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CPB2Q96IY4 423 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 ZBTB45Q96K62 511 aaPredicted RBP7.17□□□□□ -1.26
CD44-214ENST00000525211 MED15Q96RN5 788 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 STRA6Q9BX79 667 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CCDC113Q9H0I3 377 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CXCL16Q9H2A7 254 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 TNMDQ9H2S6 317 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 ZHX3Q9H4I2 956 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 ERVK-5Q9HDB9 667 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 SLC39A2Q9NP94 309 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 RNF19AQ9NV58 838 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 PANK4Q9NVE7 773 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 MAN1B1Q9UKM7 699 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 TRPV2Q9Y5S1 764 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 LTBP2Q14767 1821 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 LRRIQ4A6NIV6 560 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 CCDC169A6NNP5 214 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 H0YGN5 161 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 ABLIM1O14639 778 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 TLR3O15455 904 aaKnown RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 PRPF6O94906 941 aaKnown RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 FAM13AO94988 1023 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 TIMP1P01033 207 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 RPN1P04843 607 aaKnown RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 GNAT1P11488 350 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 DARSP14868 501 aaKnown RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 SELPP16109 830 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 HOXA11P31270 313 aaPredicted RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 CRYBB1P53674 252 aaPredicted RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 MLLT1Q03111 559 aaPredicted RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 DSC3Q14574 896 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 CSPP1Q1MSJ5 1256 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 ODR4Q5SWX8 454 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 CDCA2Q69YH5 1023 aaPredicted RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 SCARA3Q6AZY7 606 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 UNC13DQ70J99 1090 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 EPM2AIP1Q7L775 607 aaPredicted RBP7.16□□□□□ -1.26
CD44-214ENST00000525211 MYCT1Q8N699 235 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 MCPH1Q8NEM0 835 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 DBF4BQ8NFT6 615 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 FAM84AQ96KN4 292 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 TIGD1Q96MW7 591 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 SLC4A5Q9BY07 1137 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 CUEDC2Q9H467 287 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 ARHGAP28Q9P2N2 729 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 MAPK8IP1Q9UQF2 711 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 ZMYM2Q9UBW7 1377 aa7.16□□□□□ -1.26
CD44-214ENST00000525211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 MEIS3P2A8K0S8 358 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 TRAK2O60296 914 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 TSPAN1O60635 241 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 RHOBTB3O94955 611 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 CXCL10P02778 98 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 KRT18P05783 430 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 MAPTP10636 758 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 MAGEA10P43363 369 aaPredicted RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 NAMPTP43490 491 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 PMS1P54277 932 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 WNT7BP56706 349 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 SEZ6Q53EL9 994 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 PLEKHG4Q58EX7 1191 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 HERC4Q5GLZ8 1057 aaPredicted RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 ZBTB41Q5SVQ8 909 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 C9orf50Q5SZB4 431 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 CAVIN1Q6NZI2 390 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 TAF2Q6P1X5 1199 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.15□□□□□ -1.26
CD44-214ENST00000525211 ZNF720Q7Z2F6 126 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 HAUS6Q7Z4H7 955 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 NELFCDQ8IXH7 590 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 TMEM192Q8IY95 271 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 ZNF687Q8N1G0 1237 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 KCTD17Q8N5Z5 321 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 RETREG2Q8NC44 543 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 CAGE1Q8TC20 777 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 SCFD1Q8WVM8 642 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 KIFAP3Q92845 792 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 CCDC43Q96MW1 224 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 MAP7D2Q96T17 732 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 NTPCRQ9BSD7 190 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 TARS2Q9BW92 718 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 EIF2AQ9BY44 585 aaKnown RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 FZD8Q9H461 694 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 PARVGQ9HBI0 331 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 KMT5AQ9NQR1 393 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 CXXC1Q9P0U4 656 aaPredicted RBP7.15□□□□□ -1.26
CD44-214ENST00000525211 USP25Q9UHP3 1055 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 RABGEF1Q9UJ41 708 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 ODF2LQ9ULJ1 636 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 PADI3Q9ULW8 664 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 ST3GAL5Q9UNP4 418 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 PPME1Q9Y570 386 aa7.15□□□□□ -1.26
CD44-214ENST00000525211 MROH7Q68CQ1 1323 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms