RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRR5-ARHGAP8B1AHC4 643 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 TP53P04637 393 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-203ENST00000524927 PROS1P07225 676 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 CSF1RP07333 972 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 ICAM3P32942 547 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 ARHGAP8P85298 464 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 SDE2Q6IQ49 451 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 PAOXQ6QHF9 649 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 BEND4Q6ZU67 534 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 EEPD1Q7L9B9 569 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 JAZF1Q86VZ6 243 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 CYP2W1Q8TAV3 490 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 EZH1Q92800 747 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-203ENST00000524927 PLA2G12BQ9BX93 195 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 SUCOQ9UBS9 1254 aaKnown RBP8.58□□□□□ -1.04
NEDD8-203ENST00000524927 ANGPTL2Q9UKU9 493 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 MTUS1Q9ULD2 1270 aa8.58□□□□□ -1.04
NEDD8-203ENST00000524927 MRPL42Q9Y6G3 142 aaKnown RBP8.58□□□□□ -1.04
NEDD8-203ENST00000524927 SYNRGQ9UMZ2 1314 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 FRYQ5TBA9 3013 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 ANKRD18BA2A2Z9 1011 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 WDR64B1ANS9 1081 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 WNT11O96014 354 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 HOXB7P09629 217 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 RGS3P49796 1198 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 PMS1P54277 932 aaKnown RBP8.57□□□□□ -1.04
NEDD8-203ENST00000524927 CHAF1AQ13111 956 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-203ENST00000524927 FZD5Q13467 585 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 UBE4AQ14139 1066 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 PTPN21Q16825 1174 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 TCEAL5Q5H9L2 206 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 TDRD10Q5VZ19 366 aaKnown RBP8.57□□□□□ -1.04
NEDD8-203ENST00000524927 LETMD1Q6P1Q0 360 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 LBX2Q6XYB7 198 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 RPAINQ86UA6 219 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 MAML3Q96JK9 1138 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 CFAP53Q96M91 514 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-203ENST00000524927 SEZ6LQ9BYH1 1024 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 USP40Q9NVE5 1235 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 CEP131Q9UPN4 1083 aa8.57□□□□□ -1.04
NEDD8-203ENST00000524927 DDTLA6NHG4 134 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-203ENST00000524927 DYNC1LI2O43237 492 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-203ENST00000524927 BAIAP3O94812 1187 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 ASGR1P07306 291 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 CLCN5P51795 746 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 MRM1Q6IN84 353 aaKnown RBP8.56□□□□□ -1.04
NEDD8-203ENST00000524927 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 CDH24Q86UP0 819 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 KLHL6Q8WZ60 621 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 SCLYQ96I15 445 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-203ENST00000524927 NSUN3Q9H649 340 aaKnown RBP8.56□□□□□ -1.04
NEDD8-203ENST00000524927 PFDN2Q9UHV9 154 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 DLG5Q8TDM6 1919 aa8.56□□□□□ -1.04
NEDD8-203ENST00000524927 SIP14410 1827 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 LINC01553A4QN01 128 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 FRAT2O75474 233 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-203ENST00000524927 ZNF865P0CJ78 1059 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-203ENST00000524927 RFC2P35250 354 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 GRIK1P39086 918 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 SHC2P98077 582 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 CDK5R2Q13319 367 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 ANGPT1Q15389 498 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 CLUL1Q15846 466 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 PRR23BQ6ZRT6 265 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 ABRAQ8N0Z2 381 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 DCLK2Q8N568 766 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 ZGPATQ8N5A5 531 aaKnown RBP8.55□□□□□ -1.04
NEDD8-203ENST00000524927 ST13P5Q8NFI4 369 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-203ENST00000524927 GIMAP7Q8NHV1 300 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 RIN3Q8TB24 985 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 PPP1R13LQ8WUF5 828 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 MKRN2Q9H000 416 aaKnown RBP8.55□□□□□ -1.04
NEDD8-203ENST00000524927 CD207Q9UJ71 328 aa8.55□□□□□ -1.04
NEDD8-203ENST00000524927 C9IYK1 514 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 TAF4O00268 1085 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 SUSD5O60279 629 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 CLSTN1O94985 981 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 SLITRK5O94991 958 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 EYA4O95677 639 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 ETV3P41162 512 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 KCNJ6P48051 423 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 HEATR6Q6AI08 1181 aaKnown RBP8.54□□□□□ -1.04
NEDD8-203ENST00000524927 DEFB128Q7Z7B8 93 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 PPFIBP1Q86W92 1011 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 LILRB2Q8N423 598 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 CRACR2BQ8N4Y2 399 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-203ENST00000524927 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 SHCBP1Q8NEM2 672 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 RAD9AQ99638 391 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
NEDD8-203ENST00000524927 COL11A1P12107 1806 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-203ENST00000524927 CLSPNQ9HAW4 1339 aa8.54□□□□□ -1.04
NEDD8-203ENST00000524927 MYADML2A6NDP7 307 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 PLIN1O60240 522 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 DUSP11O75319 330 aaKnown RBP8.53□□□□□ -1.04
NEDD8-203ENST00000524927 NAT2P11245 290 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms